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SCNpilot_cont_300_bf_scaffold_807_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: 2732..3079

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirB2 component n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2K0_SPHJU similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 108.0
  • Bit_score: 192
  • Evalue 2.60e-46
virB2; type IV secretory pathway VirB2 component; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 108.0
  • Bit_score: 192
  • Evalue 8.30e-47
Type IV secretory pathway VirB2 component {ECO:0000313|EMBL:BAI96832.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 108.0
  • Bit_score: 192
  • Evalue 3.70e-46

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
GTGATCGACCGCCTGCGCCCAATGCGCCTGACTCAAGTGCGCCAACGTCTCGGCATGACCGTGTCCATCGCCACGCTGTCGGTAGTGATGGCCGCGCCCGCCCACGCCTCCGGCTCGTCGATGCCGTGGGAGCAACCGCTGCAACAGATCCTGCAATCGATCGAAGGCCCCGTGGCCAAAATCATCGCGGTGATCATCATCATCGTCACCGGCCTGACGCTCGCCTTCGGCGACACGTCCGGCGGCTTCCGTCGGCTGATCCAGATCGTGTTCGGTCTCTCGATCGCCTTCGCCGCGTCGAGCTTCTTCCTGTCGTTCTTCTCGTTCGGCGGCGGGGCGCTGGTCTGA
PROTEIN sequence
Length: 116
VIDRLRPMRLTQVRQRLGMTVSIATLSVVMAAPAHASGSSMPWEQPLQQILQSIEGPVAKIIAVIIIIVTGLTLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV*