ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_300_bf_scaffold_807_curated_27

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: comp(27767..29041)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGC8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 424.0
  • Bit_score: 803
  • Evalue 9.20e-230
Outer membrane efflux protein {ECO:0000313|EMBL:CEG10311.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 424.0
  • Bit_score: 803
  • Evalue 1.30e-229
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 421.0
  • Bit_score: 579
  • Evalue 6.80e-163

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGTTAAAATTGCTCCTGATAATCGTTCGCATATCAACAATTATCTTGGTGACCCCAGCCTTCGCTCAGCAGGCCGCCGTGCTGTCGATTGATGCACTTGCCAATTCCGTCGTGGCAAGTAACCCCGAACGACGCTTTTATTTCCAGCAGATCGGGCTTGCAGGTGTTGAGCGCGACGCGGCTGATCGCCTGCCGGACCCTGAAGCTGCATTCGAGTTAGGCGAACGCCGGATGGCCGACGGCCTGACAGGTGCACCGAAAGGCGCCGGGCCGACATATGGCTTGTCGATTATGCAGCCGCTCGACTTTGCCGGACGCGGGGCGCTCCGTCGCGCCATCGCCGAGCATCAGATCGCGCTGGCGCGGCTCGGTCTTGCGCAATTCGACGCAACGCTCGCAAGCCGGGCACGCTCTTTGGGATATGCCTTGTTCGCGGCCGAGCGGAAAGCCGCCGCGGCACGCGACGTTGCCGCGCGGATGCGCGAGCTTGCACGCGTTGTGGAGCAGCGGGATCCGGCGGGCATCGCCACCACGCTGGACACGGCCATTCTGGATGCGGGTGCCATCACGGCGGAGCGAAATGCCGCGATGGCTGATTCCGAGACCAGCACGATCGTCTACGAACTGAATCAACTTCGCGGCGCGCCGCTCAAAGCGCGGCTCCGCATTGCTCCGCCCGATATCACGCTGCCCGGCCTTCCGTCGGTCGAGCGCATGGCGCAACAAGCTGGCATCAACAATTTCGAGATTCAGTCGCTGCGCGCGCAATTGCAGCAGCAAGGGTTGCGCGTTGACCTCGCACAAGCAGCGCGTGTGCCGAACGTCTCAGTCGGTCCCTACTTCAATCGCGCGAAGTCAGACAGCCGCGAGACCAATTTCGGCATACGGCTGACGACGACGTTGCCGCTTTGGAATAGCCAGGCTGCTGGCCTCGCACAGGAGTTGAGCCGTCAATCCCAGGGCGATGCGGCCCTGCTCGCCGCCAACCGACGGATCGCGAGGCAGGTTTACGAACAGGCAGCCTACTACGAGGCGAAGCGTCGAGCCCTTGCGGGCTGGCCAGCCGGGGCCACCGAGAAATTTGCGGCCGCAGCTACCGCCGCCGCCGATAGTTATCGCCAGGGAGCGATCCCGATCGCAACTTACGTCGAGATGCAGCGCCAGTATCTGGACGCGCTGTCGGCTCTGCTCGACACGCGACGTGAGGCTATGGAAGCGATGCTTCAACTTCGGGCGCTCAATGGCGGCCGCAGCTTCGACGGCGTGTCCCGATGA
PROTEIN sequence
Length: 425
MLKLLLIIVRISTIILVTPAFAQQAAVLSIDALANSVVASNPERRFYFQQIGLAGVERDAADRLPDPEAAFELGERRMADGLTGAPKGAGPTYGLSIMQPLDFAGRGALRRAIAEHQIALARLGLAQFDATLASRARSLGYALFAAERKAAAARDVAARMRELARVVEQRDPAGIATTLDTAILDAGAITAERNAAMADSETSTIVYELNQLRGAPLKARLRIAPPDITLPGLPSVERMAQQAGINNFEIQSLRAQLQQQGLRVDLAQAARVPNVSVGPYFNRAKSDSRETNFGIRLTTTLPLWNSQAAGLAQELSRQSQGDAALLAANRRIARQVYEQAAYYEAKRRALAGWPAGATEKFAAAATAAADSYRQGAIPIATYVEMQRQYLDALSALLDTRREAMEAMLQLRALNGGRSFDGVSR*