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SCNpilot_cont_300_bf_scaffold_33_curated_115

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: 118539..120425

Top 3 Functional Annotations

Value Algorithm Source
ABC-type oligopeptide transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QMG0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 624.0
  • Bit_score: 1001
  • Evalue 4.40e-289
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EJZ33553.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 633.0
  • Bit_score: 1009
  • Evalue 1.70e-291
ABC transporter substrate-binding protein; K13893 microcin C transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 634.0
  • Bit_score: 999
  • Evalue 4.10e-289
  • rbh

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Taxonomy

Bradyrhizobium sp. CCGE-LA001 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1887
TTGAGCAGCGTGACGCGCATGGCGCAATTCAGCCGCCGGCATGTATTGGGTCTCGGTTTGGGCGCGCTCAGCGCAAGCTGGCTGCGGCCGTTGCACGCCGACGATGCGGCAACGGAAGCGCACGGCATGTCGGTGTTCGGCGACCTGAAGTATCCGGCGGATTTTCACCACTTCGACTACGTCAATCTCTCGGCGCCGAAGGGCGGCATGTTCTCGACGGTGCCCTCTGTGCGCGCCTACAATCAATCCTACCAGACCTTCAGTTCGCTGAATGCCTACATCCTCAAGGGCGAGGGCGCGCAGGGCATGGACCTGACCTTCGCGCCGCTGATGGTGCGTGCTGGCGACGAGCCGGATGCGATGTACGGTCTGGTCGCCAAGTCGGTGCGGATTTCAGCCGACAAGCGGACCTATCGCTTCACGCTGCGGCCTGAGGCGCGATTTCACGACGGCAGCAAGCTTACCGCGCATGACGTTGCGTTTTCGCTGACCACGCTGAAAGCCAAGGGCCATCCGCTGATCGTGCAGCAGATGCGCGATGTCGTCAGCGCCGAGGCGCTCGACGACGCCACGGTGCAGGTGGTGTTCGCCGAGAAGCACGCTCGCGATGTGCCGCTCTACGTGGCGGGCCTGCCGATCTTCTCGCGCGCTTACTATGCGTCGCGGCCGTTCGATGAATCGACGCTGGATATCCCGCTCGGCTGCGGCCCGTACAAGGTCGCCAAGTTCGAGGTCAATCGCTTCATCGAATTCGAGCGTGTCAAGGAATGGTGGGGCGCCGATCTCCCCGTGACGCGCGGCAGCTACAATTTCGATGCCGTGCGCTACGAATTCTATCGCGACCGCGATGTCGCCTTCGAAGGCTTCACCGCCAAGAACTATCTGTTCCGCGAGGAATTCACCGCGCGCGTCTGGGCGACGCGCTATGATTTTCCGGCGGTGAAGGATGGACGCGTCAAACGCGAGACACTGCCGGATGAGACGCCCTCCGGCGCGCAAGGCTGGTTCATCAATACGCGGCGCGACAAGTTCAAGGACGCGCGCGTGCGCGAAGCCTTGATCCAGGCGTTCGATTTCGAATGGACCAACAAGACCATCATGTATGGCGCCTATGCGCGGACGCAGTCGCCGTTCCAGAATTCGGACATGATGGCGAGCGGGCCGCCGTCGGCCGACGAGCTTAAATTGCTGGAGCCCTTCCGCAAGGATTTGCCGGAAGAGGTGTTCGGCGCGCCGTTCGCGCCGCCGGTGTCGGACGGCTCGGGACAGGATCGGGCGCTGCTGCGCAAGGCGTCGCAATTGCTCCGCGATGCAGGATACCCGGTCAAGGACGGCAAGCGGCTGCTGCCGAACGGCGAGGTGTTCAAGATCGAATTCCTCGCCGATGAGCCGCAGTTGCAGGCGCATCATGCGCCCTACATCAAGAATCTCGCCACCATCGGCATTGAGGCCAGCCTGCGTCTGGTCGATCCGGTGCAGTATCGCGCGCGCGTCGAAGATTTCGATTTCGATATGACGATCGAGCGCTTCAGCATGTCGGCGACGCCCGGCGATGGCATGCGGCCGTTCTTCACCTCGCAGGCGGCGCGCACCAAGGGCTCCTACAATCTCGCCGGTATCGAGAGTCCGGCGATCGACGCGCTGGTCGAGCGTATCATCGGCGCCAATTCGCGCGATGAACTGACGATAGCCTGCCGTGCCTTCGATCGCGTGTTCCGCGCCGGGCGCTACTGGGTGCCGCAGTGGTATCGCACCAACCATCCCGTCGCCTATTGGGATGTCTTCAATCATCCGGCCAAGTTGCCGCGCTATTTCGGCAGCGTCGGCGCCATCGAGTTGTGGTGGTCGGACCCCGCCAAGGCGGCCAAACCTGAGCAGGCGAAATAG
PROTEIN sequence
Length: 629
LSSVTRMAQFSRRHVLGLGLGALSASWLRPLHADDAATEAHGMSVFGDLKYPADFHHFDYVNLSAPKGGMFSTVPSVRAYNQSYQTFSSLNAYILKGEGAQGMDLTFAPLMVRAGDEPDAMYGLVAKSVRISADKRTYRFTLRPEARFHDGSKLTAHDVAFSLTTLKAKGHPLIVQQMRDVVSAEALDDATVQVVFAEKHARDVPLYVAGLPIFSRAYYASRPFDESTLDIPLGCGPYKVAKFEVNRFIEFERVKEWWGADLPVTRGSYNFDAVRYEFYRDRDVAFEGFTAKNYLFREEFTARVWATRYDFPAVKDGRVKRETLPDETPSGAQGWFINTRRDKFKDARVREALIQAFDFEWTNKTIMYGAYARTQSPFQNSDMMASGPPSADELKLLEPFRKDLPEEVFGAPFAPPVSDGSGQDRALLRKASQLLRDAGYPVKDGKRLLPNGEVFKIEFLADEPQLQAHHAPYIKNLATIGIEASLRLVDPVQYRARVEDFDFDMTIERFSMSATPGDGMRPFFTSQAARTKGSYNLAGIESPAIDALVERIIGANSRDELTIACRAFDRVFRAGRYWVPQWYRTNHPVAYWDVFNHPAKLPRYFGSVGAIELWWSDPAKAAKPEQAK*