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SCNpilot_cont_300_bf_scaffold_33_curated_140

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: comp(144853..145401)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TMF1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 182.0
  • Bit_score: 336
  • Evalue 1.40e-89
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 182.0
  • Bit_score: 338
  • Evalue 6.60e-90
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 181.0
  • Bit_score: 336
  • Evalue 7.30e-90

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCCTCTCACGGATTCTCTTCGCGACGACATTCTGGCGTCGGTCCCAAGTCTGCGCGCTTTCGCGATATCGCTGAGCGGAAATGGCGATCGTGCAGACGATCTTGTGCAGGAGACGCTATTGCGCGCTCTCGCCAACATCGACTCCTTCGAACCGGGTTCGAACCTCCCGGCATGGTTGTTCACCATCCTCCGCAACCTGTTCCGCTCTGACTATCGCAAGCGGCGGCGCGAGGTCGAAGACGCCGACGGCAACTACGCCAAGACGCTGAAATCGCAGCCCAGCCAGGGGTCGCATCTCGAGTTCGAGGAATTCCGCGCGGCTCTCGACAAGCTGCCGCAGGACCAGCGCGAAGCCTTGATCCTCGTCGGGGCGTCCGGCTTCTCCTACGAGGATGCCGCGGCTATCTGCGGATGCGCGGTGGGCACCATCAAGAGCCGCGTCAACCGAGCGCGAACCAAGCTCAGCGCCCTGCTTTACGTCAATGGCTCGGAAGATTTCGGCCCGGACGAAACGATCCGCGCAGTGATCGGAAGCGGCAACGGTTAG
PROTEIN sequence
Length: 183
MPLTDSLRDDILASVPSLRAFAISLSGNGDRADDLVQETLLRALANIDSFEPGSNLPAWLFTILRNLFRSDYRKRRREVEDADGNYAKTLKSQPSQGSHLEFEEFRAALDKLPQDQREALILVGASGFSYEDAAAICGCAVGTIKSRVNRARTKLSALLYVNGSEDFGPDETIRAVIGSGNG*