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SCNpilot_cont_500_bf_scaffold_128_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_6

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(5075..5602)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 175.0
  • Bit_score: 298
  • Evalue 7.30e-78
def; peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 175.0
  • Bit_score: 295
  • Evalue 8.10e-78
Peptide deformylase n=3 Tax=Ochrobactrum intermedium RepID=C4WGL8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 175.0
  • Bit_score: 298
  • Evalue 5.20e-78

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Taxonomy

Ochrobactrum intermedium → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGTCTGTAAAACCGCTCGTCATTCTCCCCGATCCCGTCCTGCGTCAGGTGTCGAAGCCTGTGGAGCGCTTCGACGATCCGTTGCGCAAACTCGCCGGCGATCTGCTCGACACCATGTATGACGCGCCCGGAATCGGGCTTGCCTCCATTCAGGTCGGCGTGCCGCTGCGGATGATGGTCATCGACCTTGCCAAGGACGGCGAGGAGAAGGCGCCGCACGTCTTCGTCAACCCCCGCGTGGTATCGTCCTCGGACGAGCGCAGCACCTATGAGGAAGGCTGCCTTTCGATCCCGGAATATTATGCGGAAGTGGAACGCCCCGCGCGGGTAAAGGTCGAGTATTTCGATCTCGACGGCAAGCCGCACGCGATGGAAGTCGACGGGCTGATGGCGACCTGCTTCCAGCACGAACTGGATCATCTCAACGGCGTGCTGTTCATCGATTATATTTCCAAACTCAAGCGCGACATGGTCATCAAGAAGTTCAGGAAGCTGGCCAGGGACCGCGCGCCGGCGAAAGCTCTCTAG
PROTEIN sequence
Length: 176
MSVKPLVILPDPVLRQVSKPVERFDDPLRKLAGDLLDTMYDAPGIGLASIQVGVPLRMMVIDLAKDGEEKAPHVFVNPRVVSSSDERSTYEEGCLSIPEYYAEVERPARVKVEYFDLDGKPHAMEVDGLMATCFQHELDHLNGVLFIDYISKLKRDMVIKKFRKLARDRAPAKAL*