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SCNpilot_cont_500_bf_scaffold_22_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_6

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(14979..15671)

Top 3 Functional Annotations

Value Algorithm Source
Nopaline transport system permease protein NocM n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG32_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 229.0
  • Bit_score: 369
  • Evalue 3.10e-99
Amine acid ABC transporter, permease protein His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EYR83795.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 229.0
  • Bit_score: 369
  • Evalue 4.40e-99
polar amino acid ABC transporter, inner membrane subunit; K10023 arginine/ornithine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 228.0
  • Bit_score: 308
  • Evalue 1.60e-81

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGAACTGGGACGTTATAGCCGAAAATCTGCCGCTCTATGCGCAGGGCGTGAAGCTGACGCTGCTGCTCGCCACCGTCTCCCTGACTGTGGCCTTTGCCATCGCCATACCGCTCGCCTTCATGCGCAACAGCAGCAACCGGTTCCTACGCTATGGAGTGTCCACATATACCTTGCTTTTTCGCGGCACGCCGCTCCTGGTGCAGCTCTTCCTTATTTATTACGGCCTCGCGCAATTCCAACTGGTTCGCAGTTCCGTGTTCTGGCCATGGCTTTCCAGCCCGCTCGTCTGTGTGCTGATCGCCTTCATCCTCAACACGACCGCTTATACGGTGGAGATTTTTGCTGGGGGCCTGCGGACCGTGCCTGCGGGCGAGATCGAAGCGGCGCGGGCTTACGGCATGTCCGGCTGGACGCAAGCCCGCCGCATCCTGATCCCGGCCATGCTCACGCGTTCCCTGCCGCTCTATGGCAATGAAATGATTATGATGCTGCATGCCACGTCTCTGGCCAGCACCGTGACACTTTTGGAGACCACCGGCGTCGCCCGGATGATTACCCTGAACTACTACATCCAGTTCGAACCATATGTGACGGCCGCGGCGATCTACCTGACGCTGACTTTCGTGCTGGTGACGGGCTTCCAGCTCGTTCAGCGGCGCTGTGCGGGGTATCTGCAGCAAAGAATCGGATGA
PROTEIN sequence
Length: 231
MNWDVIAENLPLYAQGVKLTLLLATVSLTVAFAIAIPLAFMRNSSNRFLRYGVSTYTLLFRGTPLLVQLFLIYYGLAQFQLVRSSVFWPWLSSPLVCVLIAFILNTTAYTVEIFAGGLRTVPAGEIEAARAYGMSGWTQARRILIPAMLTRSLPLYGNEMIMMLHATSLASTVTLLETTGVARMITLNYYIQFEPYVTAAAIYLTLTFVLVTGFQLVQRRCAGYLQQRIG*