ggKbase home page

SCNpilot_cont_500_bf_scaffold_72_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_6

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: 18381..19835

Top 3 Functional Annotations

Value Algorithm Source
Dihydropyrimidine dehydrogenase subunit A {ECO:0000313|EMBL:ERM00201.1}; EC=1.4.1.13 {ECO:0000313|EMBL:ERM00201.1};; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 484.0
  • Bit_score: 963
  • Evalue 8.50e-278
gltD; glutamate synthase subunit beta; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14] similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 484.0
  • Bit_score: 955
  • Evalue 5.20e-276
Glutamate synthase, NADH/NADPH, small subunit n=3 Tax=Ochrobactrum intermedium RepID=C4WPN4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 484.0
  • Bit_score: 963
  • Evalue 6.00e-278

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ochrobactrum intermedium → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1455
ATGGGTAAGGTAACTGGTTTTCTGGAAATCGACCGGCAGGTGGCGAAGTACCAGCCGGCGTCGGACCGCATCCGGCATTTCCGCGAATTCACCCTGCCGATGACGGACGGCGAGATCCAGAAGCAGGCGGCGCGCTGCATGGATTGCGGCATTCCGTTCTGCCACGGCCCGACCGGCTGTCCGGTCCACAACCAGATCCCCGACTGGAACGATCTGGTCTATAACGACAATTGGGATCAGGCGATCCGCAACCTGCACCTGACCAACAATTTCCCGGAATTCACCGGCCGCATCTGTCCCGCCCCGTGCGAGGAGGCCTGCACGCTCAACCTCGAGGACATGCCGGTCGCCATCAAGACGGTCGAGCAGGCGCTGGGCGACAAGGCCTATGAGCTGGGCTATGTCGTGCCGCAGCCCGCCGCCAACAAGACCGGCAAGTCGGTGGCGATCATCGGCTCCGGCCCGGCCGGCCTCGCCGCCGCCCAGCAGCTCGCCCGCGCCGGCCACATGGTCGACGTCTACGAGCGCGAGAGCCGCCCCGGCGGGTTGCTGCGCTACGGCATCCCCGATTTCAAGATGGAGAAGCACCTGATCGATCGCCGCGTGGCGCAGATGGAGGGCGAGGGCGTGCGCTTCCTCTGCGGCGTCAATATCGGCGTCGACAAGCCGCTGCGCGGGCTGCTCGACACCTATGACGCGGTGCTTTATTGCGGCGGCTCCGAGACCCCGCGCCCGGCCGGCATTCCCGGCACGGAGCTGGAAGGCGTCCACGACGCCATGCCCTATCTGGTGCAGCAGAACCGCCGCGTCGGCCGCGAGAACATCGAATCCGTGGCCTGGGCCTCGGCCCCGATCCTGGCCGGCGGCAAGCATATCGTGGTGGTCGGCGGCGGCGACACGGCGTCCGACTGCGTCGGCACGGCGTTCCGTCAGGGCGCGGTCAACGTGACCCAGCTCGACATCCGCCCGCAGCCGCCGGAAAAGGAGGACAAGCTCAGCGTCTGGCCCTATTGGGCGACCAAGATGCGCACCTCCTCCAGCCAGGCCGAGGGCGCGTCGCGCGAGTTCCAGGTGGCGACGCTCGAATTCGTCGGCGAGGACGGCGTGCTCACCCATGTGAAATGCTGCCAGGTCGACGAGAGGCGCAAGCCGATCCCCGGCTCGGAATTCTTCATCAAGGCCGACTTGGCCTTCATCGCTATCGGTTTCGCGGGGCCAGCGGAGAACAGCGTGGTGAAGGAGCTGGGCGAAAAGCTCGACATCGCCACCGACCGGCGCGGCTCGAAATCGGTCAAGGCCAACGACCGCGACTACCGCACCAATGTCGAAAAGCTCTACGCCGCCGGCGACATCCGCCGCGGCCAGTCGCTGGTGGTCTGGGCGATCCGCGAGGGCCGTCAGGCGGCCCACGCCATCGACGCCGATCTGATGGGGAGCTCGGTTCTGCCGCGCTGA
PROTEIN sequence
Length: 485
MGKVTGFLEIDRQVAKYQPASDRIRHFREFTLPMTDGEIQKQAARCMDCGIPFCHGPTGCPVHNQIPDWNDLVYNDNWDQAIRNLHLTNNFPEFTGRICPAPCEEACTLNLEDMPVAIKTVEQALGDKAYELGYVVPQPAANKTGKSVAIIGSGPAGLAAAQQLARAGHMVDVYERESRPGGLLRYGIPDFKMEKHLIDRRVAQMEGEGVRFLCGVNIGVDKPLRGLLDTYDAVLYCGGSETPRPAGIPGTELEGVHDAMPYLVQQNRRVGRENIESVAWASAPILAGGKHIVVVGGGDTASDCVGTAFRQGAVNVTQLDIRPQPPEKEDKLSVWPYWATKMRTSSSQAEGASREFQVATLEFVGEDGVLTHVKCCQVDERRKPIPGSEFFIKADLAFIAIGFAGPAENSVVKELGEKLDIATDRRGSKSVKANDRDYRTNVEKLYAAGDIRRGQSLVVWAIREGRQAAHAIDADLMGSSVLPR*