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SCNpilot_cont_500_bf_scaffold_404_curated_11

Organism: scnpilot_dereplicated_Rhizobiales_6

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: 9634..10311

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D053_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 222.0
  • Bit_score: 314
  • Evalue 9.00e-83
Hypothetical transcriptional regulator yncC {ECO:0000313|EMBL:GAJ37518.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 225.0
  • Bit_score: 319
  • Evalue 3.00e-84
transcriptional regulator GntR similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 208.0
  • Bit_score: 143
  • Evalue 8.60e-32

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Taxonomy

Bradyrhizobium sp. DOA9 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
TTGAATCTCGAAAATGAACCGCCGAGCCGGGCCTCTCAGGAACCCGATCTTTCGCCCGTGTCGCGGGATGTGCTTCATGAGCAGATCTACGAGCGCCTCAAGCGCAACCTGATGATGGGGCGCTTCACGCCGGGACAGAAGCTTCCGCTGCGCGGACTGGCGAAAAGCCTCGGAACCAGCCTGATGCCGGTGCGCGACGCGCTGCAGCGGCTGGAGAGCACGGGCTGCGTTTCCTCGCTGCCCAACCGTACGATGGTCGTGCCGGAATTCAGCTCCAAGGAGCTTCAGGACATCTGCGTGCTGCGCACCGTGCTGGAGGGGGCGACGGCGGAACGCGCCGCTGTGATGCGCACGGAGGCGGAGCTGGAGACGCTCCGGGCCTATGTGGACGACATCTGCCGCGCGGAGCGCACGAACGACATCGACCTTTTCCTGGAGGCGAACTACCATTTCCACATGTTGATCGCCGATATGAGCCGGCTGAGCTTCATCGGATATCTGCTGGAGCCGCTGTGGATGCATATCGGTCCCTCCATCAGGCGGTCAGTGCCGAACCGGGCGCTGTTCGAAAGCGCGGCGCGGAGACACACGGACGTCTATGAAGCCATCGTCGCCCGCGATGTTCAGACAGCGGTGACCGCAATCCAGCGCGACATTCTGGACGGCTACGCGTTCTAG
PROTEIN sequence
Length: 226
LNLENEPPSRASQEPDLSPVSRDVLHEQIYERLKRNLMMGRFTPGQKLPLRGLAKSLGTSLMPVRDALQRLESTGCVSSLPNRTMVVPEFSSKELQDICVLRTVLEGATAERAAVMRTEAELETLRAYVDDICRAERTNDIDLFLEANYHFHMLIADMSRLSFIGYLLEPLWMHIGPSIRRSVPNRALFESAARRHTDVYEAIVARDVQTAVTAIQRDILDGYAF*