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SCNpilot_expt_1000_bf_scaffold_4346_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4346_curated_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..490
DNA (489bp) protein (163aa)
Putative amidophosphoribosyltransferase n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0JV36_RHILV
Putative amidophosphoribosyltransferase {ECO:0000313|EMBL:EJC68279.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
phosphoribosyltransferase protein
SCNpilot_expt_1000_bf_scaffold_4346_curated_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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546..809
DNA (264bp) protein (88aa)
Glutaredoxin protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4S1_9RHIZ
Glutaredoxin protein {ECO:0000313|EMBL:ENN87594.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
grxC; glutaredoxin 3
SCNpilot_expt_1000_bf_scaffold_4346_curated_3
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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815..1666
DNA (852bp) protein (284aa)
Nitrilase and fragile histidine triad fusion protein, putative n=1 Tax=Ricinus communis RepID=B9THC5_RICCO
nitrilase and fragile histidine triad fusion protein, putative
Nitrilase and fragile histidine triad fusion protein, putative {ECO:0000313|EMBL:EEF24738.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
SCNpilot_expt_1000_bf_scaffold_4346_curated_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1663..2091
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XX01_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:CDN92978.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4346_curated_5
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2177..2926)
DNA (750bp) protein (250aa)
ubiG; 3-demethylubiquinone-9 3-O-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8A7A9_RHIRD
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_expt_1000_bf_scaffold_4346_curated_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3199..3963
DNA (765bp) protein (255aa)
SH3 type 3 domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFY7_RHITR
Uncharacterized protein {ECO:0000313|EMBL:AHK43770.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SH3 type 3 domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4346_curated_7
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4212..5486
DNA (1275bp) protein (425aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
lysC; aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase n=1 Tax=Rhizobium sp. CF142 RepID=J2AQ58_9RHIZ
SCNpilot_expt_1000_bf_scaffold_4346_curated_8
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5570..7837
DNA (2268bp) protein (756aa)
ptsP; phosphoenolpyruvate--protein phosphotransferase (Enzyme I of the phosphotransferase system) (EC:2.7.3.9); K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PZU7_9RHIZ
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:EKF56969.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
SCNpilot_expt_1000_bf_scaffold_4346_curated_9
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7922..9004
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=1 Tax=Rhizobium sp. RepID=L0NJ27_RHISP
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093, ECO:0000313|EMBL:CCF21103.1}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
prfA; peptide chain release factor 1
SCNpilot_expt_1000_bf_scaffold_4346_curated_10
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9001..9882
DNA (882bp) protein (294aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacte
hemK; protoporphyrinogen oxidase (methyltransferase) protein; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Release factor glutamine methyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J2JBC6_9RHIZ
Displaying 10 items

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