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SCNpilot_expt_1000_bf_scaffold_1340_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 842..1318

Top 3 Functional Annotations

Value Algorithm Source
Chemotaxis signal transduction protein n=1 Tax=Rhizobium sp. CF122 RepID=J3BL26_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 158.0
  • Bit_score: 275
  • Evalue 4.20e-71
Chemotaxis signal transduction protein {ECO:0000313|EMBL:EJL52914.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 158.0
  • Bit_score: 275
  • Evalue 6.00e-71
cheW5; chemotaxis signal transduction protein; K03408 purine-binding chemotaxis protein CheW similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 158.0
  • Bit_score: 273
  • Evalue 3.90e-71

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGCTCCGATCAATTCGACCAACTATGGCGGCGAGACCATCGAGATCATCGCTTTCCGCATCCACGATCAGGAGTTCTGCGTCAAGACGACCTCGATCCGCGAAATCCGCGGCTGGGCGCCTTCGACGCCGATCCCGCATTCGCCTCCGGATGTGGTCGGCGTCATGAATCTGCGCGGTTCGGTGATCCCGATCATCGACCTCGCCTACAAGCTCGGCATGAGCAGCATCGTCGCCAACGAGCGCAGCGCCATCGTCGTCGCCGAAGTCCACAATATGGTGATCGGCATGCTGGTCGACCGCGTTTCGGACATCCTGACGATCTCCGCGACCCAGGTTCAGCCGGTCCCGGAAGTCACCGCCTCCTTCGACAAATCCTATTCCGAAGGCATCATTGCCAGCGAGGCCGGCATGATCTGCTTCCTCAACCTGACGAAGATGTTCAAGGAAAGCGACAACGACGACCTCGCCGCCTGA
PROTEIN sequence
Length: 159
MAPINSTNYGGETIEIIAFRIHDQEFCVKTTSIREIRGWAPSTPIPHSPPDVVGVMNLRGSVIPIIDLAYKLGMSSIVANERSAIVVAEVHNMVIGMLVDRVSDILTISATQVQPVPEVTASFDKSYSEGIIASEAGMICFLNLTKMFKESDNDDLAA*