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SCNpilot_expt_1000_bf_scaffold_1340_curated_47

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 42121..44667

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J2LBK7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 848.0
  • Bit_score: 1230
  • Evalue 0.0
Glycosyl transferase family 1 {ECO:0000313|EMBL:KGD87491.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 848.0
  • Bit_score: 1239
  • Evalue 0.0
hypothetical protein; K02004 putative ABC transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 848.0
  • Bit_score: 1222
  • Evalue 0.0

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2547
ATGAAGGGCCTGTCATCGCGGCTGAAACTCGCCCTCCGGCTGGCGTTGCGCGAATTGCGCGGCGGTCTCTCCGGCTTCTACATTTTCCTCGCCTGCATCGCACTCGGCACCGGGGCGATCGCGGCAGTCAATTCCGTCGCCTCGTCGATATCGGATGCGATTGCCGCGCAAGGGCAGAGCCTGCTTGCCGGCGACCTGCGCTTCGAGCTGAACAATCGCGAGGCCTCGCCGGACGAATTCGCCTATCTGAAAAGCCTCGGGGATATTTCCGTATCGACCGGATTGCGCTCCATGGCGCGCCTGCCGGACGGGTCCGACCAGTCGCTGACCGAGGTGAAGGCGGTCGATCCGGCCTATCCGCTCTATGGCGCTTTCGAGGCCAATGAAGGCGGGGCGCTTCCCGATCTCATCGGCAAGCGCGGCGACGCGTTCGGCACGGTGGTCGCCCCCCTGATCCTCGACCGTCTCGGCCTCAAGCTCGGCGATGCCCTGCTGCTCGGCAAGGCGCGGCTGGTGATTGCCGGCACGGTGAAAACCGAGCCGGATGCGATTTCCGAAGGTTTTGGGTTTGCGCCGCGCCTGCTGATCAGCCGCGAGGCGCTGGCGGCGACCGGGCTGACCCAGACCGGTAGCCTTGTCGAGAATGCCTACAAGATCAGGCTGAAGCCGGGTTCCGCAACGCCGACCGCGCTCCAAGCGGAGGCGACGAAAAAATTTCCCGACGCCGGTTGGTCGATCCGAACCAGCGACCGCGCAGCACCGGCGCTCAGCGACAACGTCACCCGCTTTTCGCAGTTTCTGACGCTGGTCGGGCTGACGGCGCTGATCGTCGGCGGCGTCGGCGTCGCCAATGCGGTGCGCGCCTTTCTCGATGCCAAGCGGACCACCATCGCCACCTTCAAATGCCTGGGCGCACCGGCCTCGGTGGTCGCCGCCATCTATCTTTTCCAGATCCTGCTGATCGCCGGCATCGGCATTTTGATCGGCCTCGTCCTCGGGGCGGTGGCGCCGATGGTTGCGGCACCCTTCCTTGCCGCCGTGCTGCCGGCTCCGGCGGAGCCGGCGCTCTATCCGGCCGCGCTGGCGCTGGCCGCCGTCTTCGGCCTGCTGACGACGCTCGCTTTCGCCATCCTGCCGCTCGGCCATGCCCGGGAAGTGCCGGCCACCGCCCTGTTCCGTGAGCAAGGTTTCGAGAGGGCAGGGCTTCCCTCCTGGCCCTATCTGGCGGCGGCGGGCATCATCCTTGCGCTTCTCTGCGCCTTGGTGGTCGCCACCGCCTTCGACCGTTTCATCGCCGCGATCTTTCTGGTCTCTGTCGCTGGGGCTTTCATCCTGCTGCGGCTGGTGGCGGCCGGGATTGCGGCGCTGGCGAAACGCAGCCCGCAGGTGCATTCGCCGGCGCTGCGACTGGCCATCGGCAATATCCATCGCCCCGGCGCGCTGACGCCCTCGGTGGTGCTGTCGCTCGGCCTCGGCCTTGCGCTCTTGGTGACGCTGGCGCTGATCGACGGCAACCTGCGGCAGGCGCTGACCCGCAACCTGCCGGAACGGGCGCCGAACTTTTTCTTCGTCGATATCCAGGGCAGCGAGGTCGAGGGGTTTCGAAAACTCGTCTCGACCGAATTGCCGCAGAGCAAACTCACCGAGGTGCCGATGCTGCGCGGACGCATCCTCGCCTTCAACGGCCAGGACGTGAGCAAGATGGAGGTGCCGCCGAATGCGCGTTGGGTGCTGCGCGGCGATCGTGGCATCACCTATGCCGAGACCCTGCCGGAAGGCTCGCTGGTGACGCAGGGGGAATGGTGGCCGGCAAACTATAGCGGCGAGCCGCTCGTCTCCTTCTCGGCGCAGGAGGCCGGCGACCTTGGCCTCAAGCTCGGCGATAGCGTCACCGTCAATGTGCTCGGCCGCAGCATCACCGCGAAAATCGCCAATCTCAGGCAGGTGCAGTGGGAATCATTGTCGATCAATTTCGTCATGGTGTTTTCGCCCAACACGTTTGCCGGCGCGCCGCATGCCTGGCTGGCGACACTCACCGATGCCGGCGCCACGGCAGCCGAAGAGGCGACGCTTTTGCGCAAGGTCACCAACACCTATCCGACGATCACCAGCGTGCGCGTCAAGGATGCGCTGGATATCGTCAGCGGCCTTGTCGGGCAGTTGGCGGTGGCGATCCGGGCGGCGGCCTCGGTGGCGCTGGTCGCCTCGGTTCTGGTGCTGGCCGGCGCGCTTGCCGCCGGAAACCGCGCCCGCACCCATGACGCCGTGGTGCTGAAGACGCTGGGGGCGACGCGCGGGTTGCTGATTCGCGCCTTCTCCTACGAATACCTGTTGCTGGGGCTGGCGACCGCCGTCTTCGCGCTCGCCGCCGGTGGCGTTTCCGCCTGGTTCGTGGTGACGCGGGTGATGAAATTGCCTTCCGCCTTCCTCGGCGATGTCGCGATCGGAACGGTCGTCGTGGCGCTGGTGATGACGGTCGGCATCGGCCTCATCGGCACATGGCGGGTGCTGGGGCAGAAGGCGGCGCCGGTCCTGCGCGAGTTGTAG
PROTEIN sequence
Length: 849
MKGLSSRLKLALRLALRELRGGLSGFYIFLACIALGTGAIAAVNSVASSISDAIAAQGQSLLAGDLRFELNNREASPDEFAYLKSLGDISVSTGLRSMARLPDGSDQSLTEVKAVDPAYPLYGAFEANEGGALPDLIGKRGDAFGTVVAPLILDRLGLKLGDALLLGKARLVIAGTVKTEPDAISEGFGFAPRLLISREALAATGLTQTGSLVENAYKIRLKPGSATPTALQAEATKKFPDAGWSIRTSDRAAPALSDNVTRFSQFLTLVGLTALIVGGVGVANAVRAFLDAKRTTIATFKCLGAPASVVAAIYLFQILLIAGIGILIGLVLGAVAPMVAAPFLAAVLPAPAEPALYPAALALAAVFGLLTTLAFAILPLGHAREVPATALFREQGFERAGLPSWPYLAAAGIILALLCALVVATAFDRFIAAIFLVSVAGAFILLRLVAAGIAALAKRSPQVHSPALRLAIGNIHRPGALTPSVVLSLGLGLALLVTLALIDGNLRQALTRNLPERAPNFFFVDIQGSEVEGFRKLVSTELPQSKLTEVPMLRGRILAFNGQDVSKMEVPPNARWVLRGDRGITYAETLPEGSLVTQGEWWPANYSGEPLVSFSAQEAGDLGLKLGDSVTVNVLGRSITAKIANLRQVQWESLSINFVMVFSPNTFAGAPHAWLATLTDAGATAAEEATLLRKVTNTYPTITSVRVKDALDIVSGLVGQLAVAIRAAASVALVASVLVLAGALAAGNRARTHDAVVLKTLGATRGLLIRAFSYEYLLLGLATAVFALAAGGVSAWFVVTRVMKLPSAFLGDVAIGTVVVALVMTVGIGLIGTWRVLGQKAAPVLREL*