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SCNpilot_expt_1000_bf_scaffold_1509_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 264..2726

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent helicase HrpB n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHA2_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 819.0
  • Bit_score: 1288
  • Evalue 0.0
ATP-dependent helicase HrpB {ECO:0000313|EMBL:AGB69494.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 819.0
  • Bit_score: 1288
  • Evalue 0.0
hrpB; ATP-dependent helicase HrpB similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 819.0
  • Bit_score: 1288
  • Evalue 0.0

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2463
ATGACCCTCGACCTGCCGCAGCTGCCCGTCTCTTCCGTACTGCGCGATATCGCCACGGGTCTGGCCCGCGAGGGTCGCGCGGTTCTGTCGGCACCGCCGGGGGCCGGCAAGACGACGCTGGTGCCGCTGTCGCTGCTCGATCAGGACTGGCGCGGCGACGGGAAGATCATTCTCCTGGAGCCGCGGCGGCTGGCGGCGCGGGCGGCGGCGAGCCGCATGGCCTCTCTGCTGGGTGAATCGGTCGGCGAGACGGTGGGGTATCGGATGCGGCTCGACAATCGCGTTTCGGGCAAGACGCGGATCGAGGTGGTGACCGAAGGGGTTTTCGCACGGATGATTCTGGAGGATCCGGAACTGTCCGGGGTCGCGGCTGTTATCTTCGACGAATTCCACGAGCGCTCACTGGATGCGGATTTCGGGCTGGCGCTGGCGCTCGACGTGCGCTCGGCGCTGCGCGACGACCTGCGCATCCTTGTGATGTCGGCGACGCTGGATATCGAGCGGGTCGCCGGCCTGCTCGACCATCCGCCGTTCATCGAAAGCCAGGGGCGGAGTTTTCCGGTCGAGGTCCGCCATCAGGAGCGGCCGGCGGGCGAGCCGATCTGGGAAACCGTGGCGCGGGCGATCCGGGCGGCGCATCGCGAGGAAGGCGGATCGATCCTTGCCTTTCTGCCTGGCCAATCCGAAATTTTACGCACGGCGGCCTTGCTGGAGGAGCGGCTCGATCCCGACACGATCATCGCGCCGCTCTATGGCAATCTTTCCCAAGCCGAGCAGGACGCGGCGATCCGGCCGGCACCGGCCGGGAGCCGCAAGATCGTGCTCGCCACCTCGATTGCCGAAACCTCGATCACCATCGACGGCGTGCGCATCGTCATCGACAGCGGCTTGCAGCGGCTACCGGTGTACGAGCCGGCGACGGGTATCACACGGCTGGAAACGGTGCGGGTGTCACGCGCCTCCGCCGACCAGCGCGCCGGCCGCGCCGGGCGAACCGAACCGGGCATCGCCATTCGCCTGTGGCATGCGGGGCAAACGGCAGCCCTGCCGGCCTTCACGCCGCCGCAGATTCTCTCCAGCGACCTTTCGGGGCTGGCGCTCGATCTTGCCCATTGGGGCGTGCAGGATCCGGCAGGCCTCGGCTTCATCGATCCGCCACCGGCGGCGGCCCTGGCCGAAGCGCGGGCGCTGCTGAAGCTGCTGGGCGCGCTCGACGATTCGCTGGCGCTGACGGCGCAAGGCAAACGCATGCGCGACATGGCCCTGCCGCCCCGGCTGGCGGCGATGGTTCTGGCGGCGGCGAAGGAAGGAAAGGCGCAGGAGGCGGCGCTGCTTGCCGTGCTGCTGACCGAACAGGGAGCCGGCGGCACCGGCATCGATCTGGAGGACCGGCTGCGCCGCTTCCGCAGCGAAAAGGGCGCGCGCGCCGAGGCGGCGCGGCAACTGGCGAAGCGGCTGGCGGCGCAGGCAGGCGGCGGCAAAGGGGATGGCATGCCCGCTTTGCCCGGCCCATTGCTGCTGCATGCCTTTCCCGACCGGATCGCCAGCCAGCGCGGCGGACGTGGGCGTTATGTCATGGCAAATGGGCGTGGCGCGGAATTGCCGGAGGCCGAACGGCTGGCGGCGAGCCCGATGCTGGTGGTCGCCGATCTCACCGGCCGCGCCGCGCAGGGGCGCATCCTCGCGGCGGCGGAAATTTCCCGGGGCGACGTCGAGGCGTATCTGCCCGGCGCCATCGTGCAGGAGGAGCAGAGCTTTTTCGAACGGGCCTCGCGCCAAGTGCGGGCGCGCCGCGTCACCCGGCTCGGCGCGATCATCTTCGACGACTCGCCGCTTCCTCGGCCGAGCGGCGAGGCGGCGGCGCGCGCACTGGCCGAGGGCGTGCGCGATCTCGGCCTCGACGTATTGCCGTTCAGCAAGGAGGCGCGGCAATTGCGCGATCGCATCGGCTTCCTGCATCGCGGCAGCGGCGAGCCCTGGCCGGACATGAGCGACGCGGCGCTGCTCGCACGGCTCGACGACTGGTTCGTGCCCTTCCAGGGAAGCGCGCGCGGGCTCGACGATATCGCCGCCGGCAGCCTGACGGAGGGGCTGATGTCGCTGGTGCCGCACGAGATCCAGCGCGATCTCAACCGTCTCGCGCCGACGCATTTCGTGGCGCCGACCGGGCAGCGGCATCCGATCCAGTATGACGGCGAGGAGCCTGTGCTGGCGATCCGCGTGCAGGAACTCTTCGGGCTGAAGCAGCATCCGACCGTCGGCGCCGAGCGCCGGCCGCTGCTGCTCGACCTGCAGTCGCCGGCGCACCGGACGATCCAGACGACCCGCGACCTGCCCGGTTTCTGGGCGGGCTCCTGGAAGGACGTGCGCGCCGACATGCGCGGACGTTATCCGCGCCATCCCTGGCCGGAGGATCCGGCCGACGCCGCGCCGACGACACGCGCCAAGCCGCGTGGTACATGA
PROTEIN sequence
Length: 821
MTLDLPQLPVSSVLRDIATGLAREGRAVLSAPPGAGKTTLVPLSLLDQDWRGDGKIILLEPRRLAARAAASRMASLLGESVGETVGYRMRLDNRVSGKTRIEVVTEGVFARMILEDPELSGVAAVIFDEFHERSLDADFGLALALDVRSALRDDLRILVMSATLDIERVAGLLDHPPFIESQGRSFPVEVRHQERPAGEPIWETVARAIRAAHREEGGSILAFLPGQSEILRTAALLEERLDPDTIIAPLYGNLSQAEQDAAIRPAPAGSRKIVLATSIAETSITIDGVRIVIDSGLQRLPVYEPATGITRLETVRVSRASADQRAGRAGRTEPGIAIRLWHAGQTAALPAFTPPQILSSDLSGLALDLAHWGVQDPAGLGFIDPPPAAALAEARALLKLLGALDDSLALTAQGKRMRDMALPPRLAAMVLAAAKEGKAQEAALLAVLLTEQGAGGTGIDLEDRLRRFRSEKGARAEAARQLAKRLAAQAGGGKGDGMPALPGPLLLHAFPDRIASQRGGRGRYVMANGRGAELPEAERLAASPMLVVADLTGRAAQGRILAAAEISRGDVEAYLPGAIVQEEQSFFERASRQVRARRVTRLGAIIFDDSPLPRPSGEAAARALAEGVRDLGLDVLPFSKEARQLRDRIGFLHRGSGEPWPDMSDAALLARLDDWFVPFQGSARGLDDIAAGSLTEGLMSLVPHEIQRDLNRLAPTHFVAPTGQRHPIQYDGEEPVLAIRVQELFGLKQHPTVGAERRPLLLDLQSPAHRTIQTTRDLPGFWAGSWKDVRADMRGRYPRHPWPEDPADAAPTTRAKPRGT*