ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1509_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 5630..6310

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B7120B similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 226.0
  • Bit_score: 378
  • Evalue 3.90e-102
L,D-transpeptidase domain-containing protein {ECO:0000313|EMBL:AJD39437.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 226.0
  • Bit_score: 377
  • Evalue 1.20e-101
L,D-transpeptidase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 230.0
  • Bit_score: 375
  • Evalue 1.00e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGCGCCTCCGCACTGCAATGACCGCGCTCGGCCTGGCGGCAACGCTCGCTTTGGCCGGATGCTCGACGACGAGCGAATCCGCCGACAAGGGCGGCAAGCCCGAGACCAAGAAGACCGAAACCGCCGAGTTGTTCGACAACGCCTACGGCTCGGTGACCGATGCCGGCTATACCCTGCCGGGCATTCCGGTGGAACGGGTCAAGCCGCAGTTCCGTCGCCAGATCGTCAGCTATGACAGCCAGGAACGCCCGGGCACGATCATCGTCAACACGCGCGAGCGCCATCTCTATTACATCCTGCCGGGCGGCAAGGCCGTTCGTTACGGCATCGGCGTCGGCAAGCAGGGCTTTGCCTGGGCGGGCGAGGCCTATGTCGCCTGGAAACAGGAATGGCCGACCTGGCACCCGCCGAAGGAAATGGCGCAGCGCCGTCCCGACGTCGCGCGTTATGTCGAAGCCGGCATGGGGCCTGGCCTCACCAACCCGCTCGGGGCGCGAGCCATGTATCTGTTCAACGAAGATGGCAAGGACACGCTGTTCCGCCTGCACGGCACGCCGGAATGGGCCTCCATCGGCACCGCCGCCTCCTCGGGCTGCATCCGCCTCATGAACCAGGACATCATCGACCTCTACAAGCGCGTCCGTCCCGGCCGCAGCTCCAAGGTCATCGTCATCCAGTAA
PROTEIN sequence
Length: 227
MRLRTAMTALGLAATLALAGCSTTSESADKGGKPETKKTETAELFDNAYGSVTDAGYTLPGIPVERVKPQFRRQIVSYDSQERPGTIIVNTRERHLYYILPGGKAVRYGIGVGKQGFAWAGEAYVAWKQEWPTWHPPKEMAQRRPDVARYVEAGMGPGLTNPLGARAMYLFNEDGKDTLFRLHGTPEWASIGTAASSGCIRLMNQDIIDLYKRVRPGRSSKVIVIQ*