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SCNpilot_expt_1000_bf_scaffold_6396_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1549..2037)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DV38_PSEMN similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 160.0
  • Bit_score: 144
  • Evalue 6.80e-32
Uncharacterized protein {ECO:0000313|EMBL:KJS08454.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 162.0
  • Bit_score: 255
  • Evalue 5.00e-65
hypothetical protein; K11903 type VI secretion system secreted protein Hcp similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 160.0
  • Bit_score: 144
  • Evalue 2.10e-32

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Taxonomy

Hoeflea sp. BRH_c9 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGCCGACAAACATGCATCTGAAAATCGACAGCATTCCGGGAGAATCGCGCAAGAAGGGCCATGACGACCAGATCGAGCTTCTGAGCTGGTCCTTCGGCATGGACCAGCAGGCCTCCGTCGGCCATGGCCACGGCTCGGGCGCCGGCCGCGTCAAGGTTCACGATCTCGTCGTGACGAAATATCTCTGCAAGGCGGATTCGGCGCTGATGAAGCATTGCTGCAACGGCAAGCACATTCCGGAAATCACGCTCTACGCCGAAAAGGCGGGCGGCGAGGATCCGGTCGAATACGTCAAGTTCGTTTTCAAGCAGGTTCTGGTCACCAACCATACCATCAGCGGCGCCGAGGACGGCGACCAGGTGCTGGTGCAAGTGGCGCTGAACTTCGCCGAATACGTCTTCACCTATAAGCAGCAGGAGGCTGAGGGCACCGCCGGTTCCGACGTCACCCAGGGCTGGAACATCGCGCAGAACGCAGCCGCAGCCTGA
PROTEIN sequence
Length: 163
MPTNMHLKIDSIPGESRKKGHDDQIELLSWSFGMDQQASVGHGHGSGAGRVKVHDLVVTKYLCKADSALMKHCCNGKHIPEITLYAEKAGGEDPVEYVKFVFKQVLVTNHTISGAEDGDQVLVQVALNFAEYVFTYKQQEAEGTAGSDVTQGWNIAQNAAAA*