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SCNpilot_expt_1000_bf_scaffold_3248_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 1..549

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor-1 alpha (Fragment) n=1 Tax=Plasmodium yoelii yoelii RepID=Q7R7A1_PLAYO similarity UNIREF
DB: UNIREF100
  • Identity: 35.0
  • Coverage: 163.0
  • Bit_score: 67
  • Evalue 1.20e-08
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46948.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 118.0
  • Bit_score: 84
  • Evalue 2.20e-13
elongation factor-1 alpha similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 163.0
  • Bit_score: 67
  • Evalue 3.70e-09

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Taxonomy

Methylobacterium aquaticum → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
TATCCTCGTGGCCGAAGCCGGCTGCATTCTCGACGACGTCCACAGGGCGGCGGGGGATGTCGGACGGCTGTTTCCGCTGTCGCTCGCTTCGCAAGGGTCCTGCCGCATCGGCGGCAATCTCTCCACCAATGCCGGCGGCACCGCCGTGCTCGCCTATGGCAATATGCGCCAGCTCTGCCTCGGCCTCGAGGTCGTGCTGCCGACCGGCGAGATCTGGAACGGGCTGCGCCGCCTGAAGAAGGACAATACAGGCTACGACCTGCGCGACCTGTTCATCGGCGCCGAAGGCACGCTGGGCGTCATCACCGCCGCCGTGCTGAAGCTATTTCCGCAGCCGAAGGGGCATCAGGTCGCGTTTGCCGGCCTGAAATCGCCGGAGGCAGCGCTCGCCCTGTTCGACCGCGCCACGCAGCGCTGCGGCGCGGCGCTGACCGGTTTCGAGCTCATGGCGCGCATCGGCATCGATTTCACCACCCGCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGACCGCGCAGGCGATGA
PROTEIN sequence
Length: 183
YPRGRSRLHSRRRPQGGGGCRTAVSAVARFARVLPHRRQSLHQCRRHRRARLWQYAPALPRPRGRAADRRDLERAAPPEEGQYRLRPARPVHRRRRHAGRHHRRRAEAISAAEGASGRVCRPEIAGGSARPVRPRHAALRRGADRFRAHGAHRHRFHHPPXXXXXXXXXXXXXXXXXRPRRR*