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SCNpilot_expt_1000_bf_scaffold_1531_curated_24

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(23582..24040)

Top 3 Functional Annotations

Value Algorithm Source
Protein-export protein SecB n=1 Tax=Rhizobium sp. CF080 RepID=J2TML4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 148.0
  • Bit_score: 268
  • Evalue 3.80e-69
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 148.0
  • Bit_score: 268
  • Evalue 5.40e-69
secB; preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 148.0
  • Bit_score: 264
  • Evalue 2.30e-68

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGACCGATGCCAGCCCGAGCCTCAATATCCTTGCCCAGTACATCAAGGATCTTTCCTTTGAAAATCCGGGCGCGCCGCGCTCCCTGCAGTCCCGCGACCAGGCCCCGGCGATCAACATCAATGTCAACGTCAACGCCAATCCGCTGTCGGATACGGATTTCGACGTCGTGCTGACGCTGAACACCGAAGCCCGCGACGGCGACAAGGTCGTGTTCAACTGCGAACTGGTCTATGGCGGCGTGTTCCGCATCTCCGGCTTCCCGCAGGAGCACATGCTGCCGCTGCTGTTCATCGAATGCCCGCGCCTGTTGTTCCCCTTCGCGCGCCAGATCGTCGCCGACGCCACCCGCAACGGCGGCTTCCCGCCGCTGATGATCGACCCGATCGACTTCACGCAGATGTTTACGCAGCGCATGGCCGAGGAACAGGCCCGCGCCAAGGTCGAGACCACGAACTGA
PROTEIN sequence
Length: 153
MTDASPSLNILAQYIKDLSFENPGAPRSLQSRDQAPAININVNVNANPLSDTDFDVVLTLNTEARDGDKVVFNCELVYGGVFRISGFPQEHMLPLLFIECPRLLFPFARQIVADATRNGGFPPLMIDPIDFTQMFTQRMAEEQARAKVETTN*