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SCNpilot_expt_1000_bf_scaffold_1532_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 3548..4240

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhizobium sp. CF080 RepID=J3CQ21_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 230.0
  • Bit_score: 414
  • Evalue 8.50e-113
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EUC00203.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 230.0
  • Bit_score: 414
  • Evalue 1.20e-112
kdpE; two component response regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 228.0
  • Bit_score: 395
  • Evalue 1.30e-107
  • rbh

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGACCAAGACTGCGGTGCGCATCCTGATCGTCGACGACGAACCGCCGATCCGCAAGCTGCTGCGCGTCGGGCTGGCGACGCAGGACTATGTCGTCAGCGAAGCGATGAACGCCAGGGTCGCCATCGAGATGGTGAAGACCGAACAGCCCGACCTCATCGTCCTCGATCTCGGCCTGCCGGACATGGGCGGCCACGACCTGCTGGCGAAATGGCGGGACGAAGGGCTGGACCTCCCCATCGTCATCCTGTCGAGCCGCACCGACGAGGCCGGCATCGTCAAGGCGCTGGAAATCGGCGCCGACGACTATATCGCCAAACCCTTCGGCATGAACGAACTCGTCGCCCGCATCCGCGTCGCATTGCGCCATCGGCTGCAAACGCAGGGCGAAAAGCCGGTCTTCCAGACCGGGGATCTCACCGTCGATCTCGTCAAGCGCATCGTCAAGGTCGAGGGCCATGAGATAAAACTGTCGCCGAAGGAATACGATATCCTGCGCATCTTCGTGCAGCATGCCGGCAAGGTGCTGACCCATCGCTACCTGCTCGAACATGTCTGGGACGGGCTGACCGATGTGCAATATCTGCGCGTCTATGTGCGGCAGTTGCGCCAGAAGATCGAGAAGACCCCCGACCAGCCGCGCTACATCCTCACCGAGACCGGCATAGGTTACCGCCTCAAGGAGGGCCAGTAA
PROTEIN sequence
Length: 231
MTKTAVRILIVDDEPPIRKLLRVGLATQDYVVSEAMNARVAIEMVKTEQPDLIVLDLGLPDMGGHDLLAKWRDEGLDLPIVILSSRTDEAGIVKALEIGADDYIAKPFGMNELVARIRVALRHRLQTQGEKPVFQTGDLTVDLVKRIVKVEGHEIKLSPKEYDILRIFVQHAGKVLTHRYLLEHVWDGLTDVQYLRVYVRQLRQKIEKTPDQPRYILTETGIGYRLKEGQ*