ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1532_curated_9

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(8153..9370)

Top 3 Functional Annotations

Value Algorithm Source
Putative replication protein C n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4K1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 397.0
  • Bit_score: 547
  • Evalue 1.10e-152
Putative replication protein C {ECO:0000313|EMBL:EYR77542.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 397.0
  • Bit_score: 547
  • Evalue 1.60e-152
repc3; putative replication protein C similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 406.0
  • Bit_score: 532
  • Evalue 1.20e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGCAGAGTGAAAATGTGACGACGCCCTTCGGGCGGCGCAGGATGACGCTTGCCCTGGTGAAACGCCAGCTCGAAACCGCAAGGGCCGAAGTGCAGGTGCGGCGGCCGGTCGACAAATGGAAGCTGTTTCGCGATGTCTGCGAGGCGAAGGATGTCTTCGGCCTGCAGGACCGGGCGCTCGCCGTGCTCGATGCGCTGCTCAGCTTCTATCCCGAGAGCGAACTCTCCGAAGAGCATGGGCTGATCGTCTTCCCTTCGAATGCGCAATTGTCGATCCGCGCCCATGGCATCACCGGCACGACGCTGCGCCGTCATCTCGCGGCATTGGTCGAGGCCGGCCTGATCCAGCGGCGCGACAGCCCGAACGGCAAGCGTTACGCCCGCAAGGGTCGGGGCGGGGAGATCGAGGATGCCTTCGGCTTCAACCTGGCGCCGCTTCTGGCGCGCGCCGAAGAGCTTGCCGCCCTCGCCCAGGAGGGCGCAGACGAAAGACTACGCTTCAAGCGCACAAGGGAAGCCCTGACGCTCTGCCGCCGCGATGTGCGCAAGCTGATCTCGGCCGCCATGGAGGAAGGCGCCGACGGCGATTGGGCCGCCATCGAGCAGCATTATGTAACGCTGGTCGCCCGGCTGCCGCGCAATCCCGCGCGTCTGGAGATCGCCGCCATTCTCGACGAGATGGATCTTTTGCGGCAGGAGATCCTCAACATTCTGGAAATGCAACTTGTTTCATCAAAAACAGACGCCAATGCCGACCGGAATGGCGCACACAAACAGAATTCAAATACACACCTCATCCATGAATCTGAACCTCGCTTCGAAAAGAAGCAGGACGCGCCGAATTCCGTACCCGAGATGGCGGATCTCGACCGAATGCCCGCATTTCCGTTGGGGACGGTGATGCGGGCCTGCCCGCAGATCGGCGATTACGGGCCGGGCGGGGCGGTGGCGCAGTGGCGCGATCTCCTGTCGGCGGCGGTGGTGGTCCGTTCGACGCTCGGCATCAGTCCGTCTGCCTATCAGGATGCCTGCGACACGATGGGGGCGGAAGATGCGGCAATTGCCGTCGCCTGCATCCTCGAACGAGCAGGGCATATCCAGTCGGCCGGCGGTTATCTGCGGGATCTGACGCGTAGGGCGGCGCGCGGCGAGTTTTCGCTGGGGCCGATGCTGATGGCGCTGCTCAGGACGGCGACGCCGGCATCGAAGGCGGGTTAG
PROTEIN sequence
Length: 406
MQSENVTTPFGRRRMTLALVKRQLETARAEVQVRRPVDKWKLFRDVCEAKDVFGLQDRALAVLDALLSFYPESELSEEHGLIVFPSNAQLSIRAHGITGTTLRRHLAALVEAGLIQRRDSPNGKRYARKGRGGEIEDAFGFNLAPLLARAEELAALAQEGADERLRFKRTREALTLCRRDVRKLISAAMEEGADGDWAAIEQHYVTLVARLPRNPARLEIAAILDEMDLLRQEILNILEMQLVSSKTDANADRNGAHKQNSNTHLIHESEPRFEKKQDAPNSVPEMADLDRMPAFPLGTVMRACPQIGDYGPGGAVAQWRDLLSAAVVVRSTLGISPSAYQDACDTMGAEDAAIAVACILERAGHIQSAGGYLRDLTRRAARGEFSLGPMLMALLRTATPASKAG*