ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1333_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(12369..12479)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, integral membrane subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FAN5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 36.0
  • Bit_score: 70
  • Evalue 3.70e-10
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EHS50141.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 36.0
  • Bit_score: 70
  • Evalue 5.20e-10
Binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 36.0
  • Bit_score: 66
  • Evalue 2.20e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 111
ATGAACGCGGTGCTCGGCGGCACCGTGGTCATCGGGTCCGTCTTCATCGCCATCAACCTGTTGTCCGACGTGCTTTACCGCATGCTCGATCCGCGCACGAGGGCAAGATGA
PROTEIN sequence
Length: 37
MNAVLGGTVVIGSVFIAINLLSDVLYRMLDPRTRAR*