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SCNpilot_expt_1000_bf_scaffold_5878_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1125..3113)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9I0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 662.0
  • Bit_score: 1225
  • Evalue 0.0
Bradyrhizobium elkanii strain UASWS1015 Contig123, whole genome shotgun sequence {ECO:0000313|EMBL:KIU54072.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 662.0
  • Bit_score: 1336
  • Evalue 0.0
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 662.0
  • Bit_score: 1215
  • Evalue 0.0

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Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1989
ATGTCGGCTACGAAAATCCTCTGGGGCCAGATCCTCACCGTCTTCGCCATCGTCCTCGTCACGACCTGGGCCGCGACGGAATGGGTAGCCTGGCGGCTCGCCTTCCAGCCCGAGCTGGGGGCGCCGTGGTTCACACTGCTCGGCTTTTCCTTCTACCTGCCACCCGCCTTCTTCTGGTGGTGGTATGGCTTTGACGCCTATGCGCCGTCGATCTTCATCGAGGGCGCCTTCATCGCCGCGTCCGGCGGCTTCCTCTCGATTGCCGTCGCCATCGGCATGTCGGTCTGGCGGGCGCGGGAAGCCAAGAAGGTCGAAACCTATGGTTCGGCGCGCTGGGCCGAGACGGAGGAAGTGAAAGGCGCGGGTCTTCTCGGTCCCGATGGCGTCGTGCTCGGGCGCTACGATCGCGGCTATCTGCGCCATGACGGGCCGGAGCATGTGCTGTGCTTCGCGCCGACACGATCCGGCAAGGGCGTCGGCCTTGTCGTGCCCTCGCTGTTGACCTGGCCGGGCAGTTCAATCGTCCACGACATCAAGGGCGAGAACTGGCAGCTCACCGCCGGCTTCCGCGCGAAACATGGCCGCGTGCTGCTGTTCGACCCGACCAATGCGAAATCGTCGGCCTACAATCCTCTGCTCGAGGTGCGCCGCGGTGAATGGGAAGTCCGTGACGTCCAGAACATCGCCGACATCCTGGTCGATCCCGAAGGGAGCCTCGAAAAGCGGAACCACTGGGAAAAGACCAGCCACGCCCTGTTGGTCGGCGCGATCCTCCATGTCCTCTACGCCGAGAAAGACAAGACGCTGGCCGGCGTTGCCGCCTTCCTCTCAGATCCGAAGCGGCCGATCGAATCCACGCTCGCCGCGATGATGAAGACCGCCCATCTCGGCGAGGCCGGGCCGCACCCGGTCATCGCCAGCGCAGCGCGCGAGCTGCTGAACAAGTCCGACAATGAACGCTCGGGCGTCCTCTCGACCGCCATGTCGTTCCTTGGTCTTTATCGTGACCCGGTGGTGGCGGAGGTAACGCGGCGCTGCGATTGGCGGATCACGGACATCGTGGGCGACAAACGGCCGACGACGCTCTACCTGGTCGTGCCGCCCTCCGACATCAATCGCACCAAGCCACTGATCCGTCTGATCCTCAATCAGGTCGGCCGCCGCCTGACCGAGGATCTGCAGGCGAAGGCGGGGCGCCACCGTCTCCTGCTCATGCTCGACGAGTTTCCGGCGCTGGGGCGGTTGGATTTCTTCGAGAGCGCGCTGGCCTTCATGGCGGGCTATGGCCTCAAGAGCTTCCTGATCGCGCAATCGCTGAACCAGATCGAAAAGGCTTACGGCGCCAACAATTCGATCCTCGACAACTGCCATGTACGTGTCAGCTTCGCCACGAACGACGAGCGCACCGCAAAGCGGGTCTCGGACGCACTCGGCACCGCGACCGAGATGAAGGCCATGAAGAACTATGCCGGTCACCGCCTGTCGCCCTGGCTCGGCCATCTGATGGTGTCGCGTTCGGAAACAGCCCGGCCGCTGCTGACGCCCGGCGAGGTCATGCAGCTTGCCTCCACCGACGAGATCGTCATGGTCGCGGGCACGCCCCCGATCCGGGCGAAGAAAGCGCGCTATTACGAGGATGCGCGGTTCAAGGAGCGCATCCTGCCACCGCCCGCGCTCGCAGCGCCGAAGCAGACGCGGCCCGATGACTGGACCACGCTGCCATTGCCGCCGCGTCCGCAGATCGCAGTCGTCAGCCAGACCGCACAAACCGGCGATGACGATCCGACCGAATCCGAACGCCGCCAGCAGCCCGAACTCAACCGAGTGAAGCCGGTCGAGAATAAGGTGCCGATCGACAATCCATTTGAGATCGATGCTGACCGCGACGACGCCGAGGACGATGTCGTGCGCAACAGCCGGATCAACCAGCTCATGCAGGGCGTGGCGCGGCAGGTATCGCTCGACCCCGGCGACGGCATGGACCTGTGA
PROTEIN sequence
Length: 663
MSATKILWGQILTVFAIVLVTTWAATEWVAWRLAFQPELGAPWFTLLGFSFYLPPAFFWWWYGFDAYAPSIFIEGAFIAASGGFLSIAVAIGMSVWRAREAKKVETYGSARWAETEEVKGAGLLGPDGVVLGRYDRGYLRHDGPEHVLCFAPTRSGKGVGLVVPSLLTWPGSSIVHDIKGENWQLTAGFRAKHGRVLLFDPTNAKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNHWEKTSHALLVGAILHVLYAEKDKTLAGVAAFLSDPKRPIESTLAAMMKTAHLGEAGPHPVIASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAEVTRRCDWRITDIVGDKRPTTLYLVVPPSDINRTKPLIRLILNQVGRRLTEDLQAKAGRHRLLLMLDEFPALGRLDFFESALAFMAGYGLKSFLIAQSLNQIEKAYGANNSILDNCHVRVSFATNDERTAKRVSDALGTATEMKAMKNYAGHRLSPWLGHLMVSRSETARPLLTPGEVMQLASTDEIVMVAGTPPIRAKKARYYEDARFKERILPPPALAAPKQTRPDDWTTLPLPPRPQIAVVSQTAQTGDDDPTESERRQQPELNRVKPVENKVPIDNPFEIDADRDDAEDDVVRNSRINQLMQGVARQVSLDPGDGMDL*