ggKbase home page

SCNpilot_expt_1000_bf_scaffold_18014_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(2208..2789)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B42CFF similarity UNIREF
DB: UNIREF100
  • Identity: 32.4
  • Coverage: 176.0
  • Bit_score: 94
  • Evalue 1.30e-16
Uncharacterized protein {ECO:0000313|EMBL:CDM56575.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.3
  • Coverage: 178.0
  • Bit_score: 92
  • Evalue 6.70e-16
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 192.0
  • Bit_score: 91
  • Evalue 4.40e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGAAGGCGACAGGTCCTTCGCCGGCAAGGTTTTCCTGCTTGCCGGCCTGGCGCTCGCTTGCCTTGCCGCTTCGTGCTGGCTCGGCTGGCGGTTCCATCAGGCGTCGGGCGGTTATCCGATCTGGCTGGTGCCGTTCGGAAACGTCTCGCCCGTCGACCTGCATGTGCTGAAGGATCTGTTGCTGCAGCCGGACCGGACACAGGCCGCCGTGCTGCTGTTCTGGATCTATGCCGGACCGGACCTCATCATGCCGGCGGTGCTGGCCGGGCTGGGGATGCTGCTGCTCAAGCGCTTCGCGCCCGGCGGCACCCTGTTCCGCAAGCCGCTGACGGCGGCCAACATGCGCGCGCTTCTGGCCGTGCCGTTGGTCTATGCGCTGGCCGATTATGCCGAGAATGCCCTGAGCCTCGCCTATTTCTGCATTGCGCAGCCGCCCGCTTGGATCATGGAAAACGCGCCGGTAGCATTGCCCTGGATCGCCAGCTTCAAGATGGCCTTCCTCTGCATCACGTTGCTGCTGACCTTGCGGTTCGTGCTGCTGCGATGGCTCGGCGTGACCCGGCCGGAGTCGCGGCGTTAA
PROTEIN sequence
Length: 194
MEGDRSFAGKVFLLAGLALACLAASCWLGWRFHQASGGYPIWLVPFGNVSPVDLHVLKDLLLQPDRTQAAVLLFWIYAGPDLIMPAVLAGLGMLLLKRFAPGGTLFRKPLTAANMRALLAVPLVYALADYAENALSLAYFCIAQPPAWIMENAPVALPWIASFKMAFLCITLLLTLRFVLLRWLGVTRPESRR*