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SCNpilot_expt_1000_bf_scaffold_5942_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4656..5297)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, RpiR family n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UCC0_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 212.0
  • Bit_score: 286
  • Evalue 2.50e-74
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 212.0
  • Bit_score: 286
  • Evalue 7.80e-75
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ABR61300.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 212.0
  • Bit_score: 286
  • Evalue 3.50e-74

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
CTGCGCCTGGCGCAGGCGCTGGCGCTCGGCCTGCCGGCCACCCATTCCGTCATCGCAGATACCGATACGCCCGACGATGTCGCCGACAAGATCTTCGACTACATGATGACCAGCCTCGACTGGGCGCGCCATCACCTCGACAAGCGGGCGCTGACGGCGGCCGTGGATTGCCTGACGGCGGCAAAACGCATCGAATTCTTCGGTTTCGGTGCCTCGGGCATCGTGGCGCGTGATGCGCAGCAGAAATTTCCGCTGTTCGGTGTGCCCTGCGGCGCGGAAATCGACTCCCACCAGCAGGTGATGACCGTTTCCATGCTGGGGCCGGGCGATGTCGCCGTGATGATTTCCAACACGGCGGCGACACGTTCCATTGTCGAGATCGCCCGGCTGGCCCGGGCGCGCGGCGCCCGTGTCATCGGCCTTGTCGGCATGAGGGGAGCGTTGACAGCGGAATGCGATATCGTGCTGCGCGCCGAGACGCTGGAAAACACCAATATCTATACGCCGACCATTTCCCGCATCGCCGCACTGACCGTCATCGATATTCTTTCCACCTCGGTGGCGCTGCGGCGCGGCGCGGCGCATATGGAAGACGTCAAGGAAATGAAGCAGGCGCTTTCCGAATTGCGGATCACGCTTTGA
PROTEIN sequence
Length: 214
LRLAQALALGLPATHSVIADTDTPDDVADKIFDYMMTSLDWARHHLDKRALTAAVDCLTAAKRIEFFGFGASGIVARDAQQKFPLFGVPCGAEIDSHQQVMTVSMLGPGDVAVMISNTAATRSIVEIARLARARGARVIGLVGMRGALTAECDIVLRAETLENTNIYTPTISRIAALTVIDILSTSVALRRGAAHMEDVKEMKQALSELRITL*