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SCNpilot_expt_1000_bf_scaffold_11478_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4345..4962)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Brucella RepID=C9VG09_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 202.0
  • Bit_score: 324
  • Evalue 7.90e-86
rbsB-2; ribose ABC transporter periplasmic D-ribose-binding protein; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 202.0
  • Bit_score: 324
  • Evalue 2.50e-86
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EEY02392.1}; TaxID=520456 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella neotomae 5K33.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 202.0
  • Bit_score: 324
  • Evalue 1.10e-85

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Taxonomy

Brucella neotomae → Brucella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
AACGCCGAGATCAACCAGATGGGCCTCGCCAAGGCGCAGCTCGTCTCCAACAATGCGCAAGGTGCGGCCCTCGGCGCCACGCAGTGGATCAAGATGCTGGGCGAACAGGGTAAGTATGTTGAACTGCTCGGCTCGCCCTCCGACAACAACGCGGCAACGCGTTCGAACGGCTATGAGAGCGTTCTGAGCCAATATCCGGCCTGGGAGAGGGTCGGCTCCGATGTCGGCAAATGGGACCGGACGCTCGGCCATGACAAAATGCAGAGCCTGCTTCAGGCGAATCCAGACGTCACGGCCGTGATCAGTGGCAACGACGAAATGGCACTCGGCGCCAATGCCGCAATCAAAGAAGCCGGCAAAATGAACCAGATCAAGGTCGGCGGCTTCGACGGCTCGCCAGACGCGGTCGAAGCAATCAAGGCCGGTGATCTTCAGTACACCGTCCTCCAGCCTCTCGCCGTATTCTCTGTCGAAGTCGTTAATCAGGCCGACCGCTTCCTCAAGACCGGCTCGACCGGCGCCGATAGCGAAAAGCAGTTGTTCGACTGCTACCTGATCACCAAGGACAACGTCGATAAATACACAAGCGCCTTCGTTCTCCAAGACGCGACCAACTGA
PROTEIN sequence
Length: 206
NAEINQMGLAKAQLVSNNAQGAALGATQWIKMLGEQGKYVELLGSPSDNNAATRSNGYESVLSQYPAWERVGSDVGKWDRTLGHDKMQSLLQANPDVTAVISGNDEMALGANAAIKEAGKMNQIKVGGFDGSPDAVEAIKAGDLQYTVLQPLAVFSVEVVNQADRFLKTGSTGADSEKQLFDCYLITKDNVDKYTSAFVLQDATN*