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SCNpilot_expt_1000_bf_scaffold_14452_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1696..2613)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type spermidine/putrescine transport system, permease component I n=1 Tax=Rhizobium sp. CF080 RepID=J2J7K5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 295.0
  • Bit_score: 502
  • Evalue 4.10e-139
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EUC00245.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 295.0
  • Bit_score: 502
  • Evalue 5.80e-139
potB; ABC transporter membrane spanning protein; K11075 putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 288.0
  • Bit_score: 501
  • Evalue 1.70e-139
  • rbh

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGTCGCAAGCTTCCGCCACATCGCCCGGAAAGGCCCGCTGGCTCGTCGTCGCCGTGCCCTATGTCTGGCTGATCCTCTTCTTCCTGATGCCCTTCGTCATCATTGTGAAGATCTCGCTGTCGGACACGGCGATTTCCATGCCGCCCTATACGCCCGTCTTCCAGGGCTTTTCGACGCTACGCGATTTTATCTCGCAGCTCGATTTCGACAATTATCTCTTCCTGACCGAAGATCCGCTCTATTCGGAGGCTTATCTGTCGTCGCTGCGCGTCGCCGTGGTCTCGACTCTGCTGCTGCTGCTGGTCGGCTATCCCATGGCGCTGTGCATGGCGCGCGCCAACCATGGTATCCGCCCGACGCTGGTGATGCTGGTCATCCTGCCGTTCTGGACCTCCTTCCTGATCCGCGTCTATGCCTGGATCGGCATTCTCAAGCCCGAGGGGCTGCTGACGCTGCTGCTGCAGAGCCTGCATCTCTACGGTCCCGACGAGCAGGTGCAGATCTTCCGCACCCAGACGGCCGTCTATATCGGTATCGTCTATTCCTACCTGCCCTTCATGGTCCTGCCGCTCTATTCTGCGCTGGAAAAGCTCGACGGGACGCTGCTGGAAGCCGCCAACGATCTCGGCTGCCCGCCATGGAAAGCCTTCTGGAAGATCACCTTCCCGCTGTCGCTGCCGGGCGTCATCGCCGGCTCGATGATCTGCTTCATCCCGATCACGGGTGAATTCGTCATTCCCGACCTGCTCGGCGGCGCGCAGACGCTGATGATCGGCAAGACGCTGTGGACCGAATTCTTCGGCAACCGAGACTGGCCGCTGGCGTCGGCCGTGGCGGTCATCCTGCTGATCGTGCTGGTCATCCCCATCGTCATCTTCCAGAACCAGCAGCGCAAGGCGGAAGGAGGCAAGGCATGA
PROTEIN sequence
Length: 306
MSQASATSPGKARWLVVAVPYVWLILFFLMPFVIIVKISLSDTAISMPPYTPVFQGFSTLRDFISQLDFDNYLFLTEDPLYSEAYLSSLRVAVVSTLLLLLVGYPMALCMARANHGIRPTLVMLVILPFWTSFLIRVYAWIGILKPEGLLTLLLQSLHLYGPDEQVQIFRTQTAVYIGIVYSYLPFMVLPLYSALEKLDGTLLEAANDLGCPPWKAFWKITFPLSLPGVIAGSMICFIPITGEFVIPDLLGGAQTLMIGKTLWTEFFGNRDWPLASAVAVILLIVLVIPIVIFQNQQRKAEGGKA*