ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5102_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 3062..4063

Top 3 Functional Annotations

Value Algorithm Source
Rep n=1 Tax=Pseudomonas syringae pv. actinidiae ICMP 19099 RepID=S6T0S9_PSESF similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 342.0
  • Bit_score: 495
  • Evalue 3.20e-137
Rep {ECO:0000313|EMBL:ABA25961.1}; TaxID=341029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CT14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 328.0
  • Bit_score: 301
  • Evalue 1.60e-78
Rep similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 328.0
  • Bit_score: 295
  • Evalue 2.00e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. CT14 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGACTGATCGGGCAAAAACGGTGTCCGGCCCGATCGGCAAGGCCTTGGAGCGCCTGGAGGCATCGATGAAGGCGAAATCGAAGGAGAAGGCCGAGACACAGGATATATCGGAGCTGCTGACCAGTCCGCAGCTGGATCTCTTCATCGCCACCGGCCGGGCCGCCTCTCCCAAGGATGAACTGGCGACCATGGAACATCCGGTCTATGCGATCGAGGATGGCGACCAGCGGATCCTGTCCTACGAACATAACGGCCAGACGCTGGAAGTCACGCCATCGGTGAAGGGTAGGGCAACCATCCATGACAAGGACATTGTGCTCTGCTGCGTCTCGAAGCTCGTCGATGCCATCAATCACGGCCAGGCGGTTTCCCGGACCGTCAGCATCACCGCCCACGACCTCCTGAAGTTCACCAACCGCAGCACCTCTGGCCGCGGCTATTATCTCCTGGAGCAGGCCCTGGACAGGCTTGCCGGCACCCGTATCAAGACATCGATCGCCACCGGCAAGCCTGCGCGGCGACGCACCAAGGCCTTCGGCCTGATTGATGCCTATGAGGCGGTGACACGCGGGCCGGAAAACCGCCTGGAGGAACTGCGCATCACGCTCAGCGAATTCACCTTCGATGCAACCTTAGCGCTCGAAGTGCTGAGCATCGATCCGGATTATTTCAAGCTGCGCAAGGGAACGGAAAAACGGCTTTACGAACTGGCCCGCAAGCATTGCGGCGATCAGGGACGCTGGAAAATCGGCCTTGATCTCCTGCAGAAGAAGGTCGGCTCCCGCCAGCCCCTCTTCAAGTTCCGGGCGGCCGTGCGCGCCATCAGCGAGGCCAACACCTTGCCGAGCTACCACATCGTTTTCCTGCACACTGATGATTCCGTTGTCTTTTATGGGCGCAACGAGGCCGGCCTCAGTGCAATGCAAGTAGATGCCATCGCCAAGACGCCGGCGACACGCTCACGCCGGAAGGCTATCCGCGAGCCTGACAATGCATCTTGA
PROTEIN sequence
Length: 334
MTDRAKTVSGPIGKALERLEASMKAKSKEKAETQDISELLTSPQLDLFIATGRAASPKDELATMEHPVYAIEDGDQRILSYEHNGQTLEVTPSVKGRATIHDKDIVLCCVSKLVDAINHGQAVSRTVSITAHDLLKFTNRSTSGRGYYLLEQALDRLAGTRIKTSIATGKPARRRTKAFGLIDAYEAVTRGPENRLEELRITLSEFTFDATLALEVLSIDPDYFKLRKGTEKRLYELARKHCGDQGRWKIGLDLLQKKVGSRQPLFKFRAAVRAISEANTLPSYHIVFLHTDDSVVFYGRNEAGLSAMQVDAIAKTPATRSRRKAIREPDNAS*