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SCNpilot_expt_1000_bf_scaffold_1549_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 3..272

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S10 n=3 Tax=Agrobacterium RepID=RS10_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 177
  • Evalue 6.80e-42
ribosomal protein S10, bacterial/organelle similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 177
  • Evalue 2.10e-42
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 177
  • Evalue 9.60e-42

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
GATCACCGGATCCTCGATGCCTCCACGCGTGAAATCGTGTCGACCGCCAAGCGCACCGGCGCCAGCGTTCGCGGCCCGGTTCCGCTGCCCACGCGTATCGAAAAGTTCACCGTCAACCGTTCTCCCCACGTTGACAAGAAGAGCCGTGAACAGTTCGAAATGCGCACGCACAAGCGTCTCCTTGATATTGTCGATCCCACCCCGCAGACCGTCGATGCTCTGATGAAGCTCGACCTGGCTGCTGGCGTCGACGTCGAAATCAAGCTCTAA
PROTEIN sequence
Length: 90
DHRILDASTREIVSTAKRTGASVRGPVPLPTRIEKFTVNRSPHVDKKSREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL*