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SCNpilot_expt_1000_bf_scaffold_1549_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 1081..1701

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=2 Tax=Agrobacterium RepID=F0L752_AGRSH similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 206.0
  • Bit_score: 363
  • Evalue 1.20e-97
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 206.0
  • Bit_score: 364
  • Evalue 1.30e-97
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 206.0
  • Bit_score: 363
  • Evalue 3.70e-98

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Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGAATTGAACGTCAAAACACTCGAAGGCAAGGACGCCGGCACGGTCTCCCTGTCCGACACGATCTTCGGTCTGGATCCGCGCGAAGACATCCTCGCACGCATGGTTCGCTGGCAGCTCGCTCGCAAGCAGCAGGGCACCCACAAGACCAAGACCCGCGGTGAGGTTTCCCGCACCGGCGCCAAGATGTACAAGCAGAAGGGCACCGGTCGCGCACGTCACCATTCGGCTCGCGCTCCGCAGTTCCGCGGCGGCGGTCGTGCACACGGCCCGGTCGTTCGTAACCACGAGCATGATCTTCCCAAGAAGGTTCGCGCTCTGGCCCTGCGTCACGCCCTGTCGGCCAAGCTGAAGTCCGAAGGACTGATCATTATCGACGAGCTGGTCGCTTCCGAAGCAAAGACCAAGGCTCTGGTCGGTACGTTCCAGACGCTGGGTCTCACCAACGCCCTCTTCATCGGCGGCGCAGAGTTGGACGCCAACTTCGCACGCGCAGCCCAGAACATTCCGAACATGGACGTTCTGCCGATCCAGGGCATCAATGTTTACGACATTCTGCGTTGCGGCAAGCTCGTCCTGTCCAAGGCTGCAGTTGAAGCTCTGGAGGAGCGGTTCAAATGA
PROTEIN sequence
Length: 207
MELNVKTLEGKDAGTVSLSDTIFGLDPREDILARMVRWQLARKQQGTHKTKTRGEVSRTGAKMYKQKGTGRARHHSARAPQFRGGGRAHGPVVRNHEHDLPKKVRALALRHALSAKLKSEGLIIIDELVASEAKTKALVGTFQTLGLTNALFIGGAELDANFARAAQNIPNMDVLPIQGINVYDILRCGKLVLSKAAVEALEERFK*