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SCNpilot_expt_1000_bf_scaffold_1549_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 3525..4253

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EV35_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 242.0
  • Bit_score: 469
  • Evalue 2.30e-129
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 241.0
  • Bit_score: 472
  • Evalue 3.00e-130
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 241.0
  • Bit_score: 463
  • Evalue 5.30e-128

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGGGTCAGAAAATCAATCCGATCGGTTTTCGCCTCGGCATCAACCGTACCTGGGACAGCCGTTGGTTCGCCGACAACGCCGAATACGGCCAACTGCTGCATGAAGACCTGAAGATCCGCGCTTACCTGATGGAAGAGCTGAAGCAGGCCGGCATCGCCAAGGTGGTCATCGAGCGTCCGCACAAGAAGTGCCGCGTCACGATCCACTCGGCTCGCCCGGGCCTGATCATCGGCAAGAAGGGCGCCGACATCGAGAAGCTTCGCAAGAAGCTTTCGGAGATGACGAACTCGGAAACGCACCTCAACATCGTTGAAGTGCGCAAGCCGGAAATCGACGCGACGCTCGTCGCCCAGTCGATCGCCCAGCAGCTCGAGCGCCGAGTGGCTTTCCGCCGTGCGATGAAGCGCGCTGTTCAGTCGGCCATGCGTCTTGGCGCCGAAGGCATCAAGATCACCTGCGCCGGCCGTCTCGGCGGCGCCGAGATCGCCCGTACGGAATGGTACCGCGAAGGTCGCGTTCCGCTTCATACGCTGCGTGCGGACATCGACTACGGTACGGCTGAAGCCGAAACCGCGTTCGGCATCTGCGGCATCAAGGTCTGGATTTTCAAGGGCGAAATCCTTGAGCACGACCCGATGGCATCCGAGCGCCGTTCGCTGGAAGGCGACGCGCAGGGTCCGAGCGGCCGTGACCGTGACCGTGGCGACCGTCGCCGCGAAAACGCTTGA
PROTEIN sequence
Length: 243
MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKIRAYLMEELKQAGIAKVVIERPHKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEIDATLVAQSIAQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRADIDYGTAEAETAFGICGIKVWIFKGEILEHDPMASERRSLEGDAQGPSGRDRDRGDRRRENA*