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SCNpilot_expt_1000_bf_scaffold_1549_curated_11

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 4933..5169

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S17 n=2 Tax=Agrobacterium RepID=RS17_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 78.0
  • Bit_score: 155
  • Evalue 3.20e-35
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 78.0
  • Bit_score: 157
  • Evalue 6.90e-36
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 78.0
  • Bit_score: 155
  • Evalue 1.00e-35

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Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGCCGAAACGCATTCTGCAGGGCGTCGTCGTCAGCGACAAGAACGAAAAGACGGTAGTAGTCCGCGTCGAGCGTCGATTCGCTCACCCGCTGCTCCAGAAGACTGTCCGTCGTTCGAAGAAGTACAAGGCGCACGACGAAAACAACCAGTACAAGGTCGGTGACATCGTTTCCATCGAGGAATGTGCACCGATCTCGAAGGACAAGCGCTGGACGGTGGTCGCCGCCCACGCCTGA
PROTEIN sequence
Length: 79
MPKRILQGVVVSDKNEKTVVVRVERRFAHPLLQKTVRRSKKYKAHDENNQYKVGDIVSIEECAPISKDKRWTVVAAHA*