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SCNpilot_expt_1000_bf_scaffold_1549_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 6780..7085

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S14 n=4 Tax=Agrobacterium RepID=RS14_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 101.0
  • Bit_score: 191
  • Evalue 5.20e-46
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 101.0
  • Bit_score: 191
  • Evalue 1.60e-46
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 101.0
  • Bit_score: 191
  • Evalue 7.30e-46

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGGCGAAGACAAGCGCAGTTGAAAAGAACAAGCGCCGCCGCAAGACCGTCGCCAGCCAGGCCACCAAGCGGGCCGCGCTGAAGGCGATCATCATGAACCAGTCGCTCCCGATCGAGGATCGCTTCAAGGCGACCTTGAAACTGGCGGAACTTCCGCGCGACGGTTCCAAGACCCGCATCCGCAACCGTTGCGAAGTGACCGGCCGTCCGCGTGCGTTTTATCGCAAGCTGAAGATGTCGCGTATTGCCCTGCGCGAGCTGGGTAACACCGGCAAGGTGCCGGGCATTGTCAAGTCGAGCTGGTAA
PROTEIN sequence
Length: 102
MAKTSAVEKNKRRRKTVASQATKRAALKAIIMNQSLPIEDRFKATLKLAELPRDGSKTRIRNRCEVTGRPRAFYRKLKMSRIALRELGNTGKVPGIVKSSW*