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SCNpilot_expt_1000_bf_scaffold_3799_curated_9

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 5868..6488

Top 3 Functional Annotations

Value Algorithm Source
protocatechuate 3,4-dioxygenase subunit alpha (EC:1.13.11.3); K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 206.0
  • Bit_score: 352
  • Evalue 6.60e-95
Protocatechuate 3,4-dioxygenase, alpha subunit n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HCE9_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 206.0
  • Bit_score: 352
  • Evalue 2.10e-94
Protocatechuate 3,4-dioxygenase {ECO:0000313|EMBL:KJF67236.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 206.0
  • Bit_score: 353
  • Evalue 1.70e-94

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Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGTACAGCCGCTCGGATATCTCAAGGAAAGCCCTTCGCAGACCGCCGGCCCTTATGTACATATCGGCTGCACACCGAATTTCGCCGGCATCCACGGCATTTTCGAGCAGGATCTCGGTGCCGGGCCGCTTTATGACGAAAAGGCCCGCGGTGAGCGCATTGCCGTCAACGGAATGGTCATCGATGGCGGCGGCAACCCGCTGAAGGATGCGCTGGTGGAAATATGGCAAGCGGATGCGGACGGGCTGCACAACAGCCCGAGCGAGACGCGCGGAACCGCCGATCCGCATTTTCGCGGCTGGGGTCGCTCTCCGGGCGATATGGAGACCGGCGAGTTCCTGTTCGAAACCATCAAGCCCGGCCGCGTTCCCTTCCGCGATGGGCGGCTGATGGCGCCGCACATCACCTTCTGGATCGTGGCGCGCGGCATCAATCTCGGCCTGCACACCCGCATGTATTTCCCGGAGGAAGTCGAGGCCAATGCCGCCGATCCGGTGCTGCTGCGCATCGAGCACCGCAACCGTGTGCCGACGCTGATCGCCCGCAAGGAGGGCGAAGGCCTCTATCGTTTCGACATCCGCCTGCAAGGCGAGGGCGAAACCGTGTTCTTCGACATCTGA
PROTEIN sequence
Length: 207
MVQPLGYLKESPSQTAGPYVHIGCTPNFAGIHGIFEQDLGAGPLYDEKARGERIAVNGMVIDGGGNPLKDALVEIWQADADGLHNSPSETRGTADPHFRGWGRSPGDMETGEFLFETIKPGRVPFRDGRLMAPHITFWIVARGINLGLHTRMYFPEEVEANAADPVLLRIEHRNRVPTLIARKEGEGLYRFDIRLQGEGETVFFDI*