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SCNpilot_expt_1000_bf_scaffold_3799_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(10348..11268)

Top 3 Functional Annotations

Value Algorithm Source
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:KJF69098.1}; EC=4.1.3.4 {ECO:0000313|EMBL:KJF69098.1};; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 305.0
  • Bit_score: 423
  • Evalue 3.40e-115
hmgL; hydroxymethylglutaryl-CoA lyase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 300.0
  • Bit_score: 421
  • Evalue 1.70e-115
  • rbh
hydroxymethylglutaryl-CoA lyase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00036CED42 similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 300.0
  • Bit_score: 425
  • Evalue 6.40e-116

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Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGGACATGCCGCAGGAGGTCCGGCTGGTCGAGGTGGGTCCGCGAGACGGCTTGCAGAACGAAAGCGCCGCCGTTTCCGTCGCGACGAGGATCGAACTGATCGAGCGCCTCGCCGCCGCCGGCCTGCCGGCGGTGGAGGCCGGCGCTTTCGTCTCGCCGAAATGGGTGCCGCAGATGGCGGCATCCGCCGCCGTCTATGCCGGCCTCACCCGGCGGCCCGGCACCGCCTATCCGGCGCTGGTGCCCAACCTGAAAGGGCTGGAAGCCGCACTTGCGGCAAAGGTCACGGAAATCGCCGTCTTCGTCTCGGCCTCCGAAAGTTTCAGCCTGAAAAACATCGCCTGTACGCGCGCCGAGAGCATCGCCCGCCTTGGCCCCGTCGCCGAACAGGCCCGCGCCCATGGCCTCGCGCTGCGCGGCTATGTCTCCTGCATCGCCGGTTGCCCCTATGAGGGCGATGTCGCGCCGGTCGAGGTGGCGGTGATGGGGCGCGAGTTGATCGGCCTCGGAGCCTATGAAATCTCGCTCGGCGACACCATCGGCGTCGGCACGCCCCGGCACATCCGCACCGTCATCGAAACCGTGGCCACCGATCTTCCGCGCGAACGAATCGCCATGCATTTCCACGACACCTATGGGCAGGGCGTCGCCAATGTCTTCGCCAGTCTGCAGGAGGGGATCGCCGTTTTCGACAGTTCCGTCGCCGGCCTCGGCGGCTGCCCCTACGCGCCCGGCGCCAGCGGCAATGTCGCGACGGAAGACGTGATGTATCTGCTGAAACGGCTCGGTATCCGCACCGGCGCCGATCTCCATACGGTCGCCGAAATCGGTGACTGGATCAGCGCCACGCTCGGCCGGACCAATGCCAGCCGCGCCGGCCGGGCGCTGCTCGCCAGAAAATTCAAGGAGGCCGCGCCATGA
PROTEIN sequence
Length: 307
MDMPQEVRLVEVGPRDGLQNESAAVSVATRIELIERLAAAGLPAVEAGAFVSPKWVPQMAASAAVYAGLTRRPGTAYPALVPNLKGLEAALAAKVTEIAVFVSASESFSLKNIACTRAESIARLGPVAEQARAHGLALRGYVSCIAGCPYEGDVAPVEVAVMGRELIGLGAYEISLGDTIGVGTPRHIRTVIETVATDLPRERIAMHFHDTYGQGVANVFASLQEGIAVFDSSVAGLGGCPYAPGASGNVATEDVMYLLKRLGIRTGADLHTVAEIGDWISATLGRTNASRAGRALLARKFKEAAP*