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SCNpilot_expt_1000_bf_scaffold_7756_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4422..5051)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002F668F5 similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 192.0
  • Bit_score: 162
  • Evalue 5.30e-37
Transcriptional regulator {ECO:0000313|EMBL:AHY54717.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 192.0
  • Bit_score: 156
  • Evalue 5.30e-35
transcriptional regulator TetR similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 202.0
  • Bit_score: 153
  • Evalue 5.90e-35

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Taxonomy

Bradyrhizobium japonicum → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGCCTATTTCCCCCGAACAGAAAGAGGAGCTGACGCAACGGATCCTCGAAGTCACCGAGCGGCAGATCGCCGAAAACGGGCTGGCGGCGGTTTCGACGCGCTCGATCGCCCGCGAGGCCGGGTGCTCCGGCGGCTCGATCTATACGCGCTTTTCCGATTTTGACGATCTGGTGCTGGCGGTCAATTCGCGGGCGCTCGCGCGTTTCGGCGCGGTGCTGGATAGGCTGGCAGCGGAGGCGGGCAACCTTTCCATCGAGGACCGCCTGATCGCCATGGCCTTCGCTTATCTCGATTTTGCGCTCAGCGAACGCAATAGCTGGAGCGCGCTGTTCGAGCACCGGCTTGCCGATGGCGATACCCTGCCCGACTGGCATCGGCGGGATCACCTGCGGCTGTTTGCCTATATCGAGGCTCCGCTGCTTGAATTTGATCCCGAACTCACCGAAGAACAGGCCGGCCAGCTCGCCCGCACGCTCTATTCGGCCGTCCACGGTATCGTCTCGGTCAGCATCGAGGACCGGCTGGGGCGGGTCGAGACCGAGGTGCTGCGCCGCCAGATCGCCGTCGTCCTCCAGGGTATCGCCGCCGGCTGGCGGCAGGTTCCGCCCTCGCGCCTGCTGGCGCGCTGA
PROTEIN sequence
Length: 210
MPISPEQKEELTQRILEVTERQIAENGLAAVSTRSIAREAGCSGGSIYTRFSDFDDLVLAVNSRALARFGAVLDRLAAEAGNLSIEDRLIAMAFAYLDFALSERNSWSALFEHRLADGDTLPDWHRRDHLRLFAYIEAPLLEFDPELTEEQAGQLARTLYSAVHGIVSVSIEDRLGRVETEVLRRQIAVVLQGIAAGWRQVPPSRLLAR*