ggKbase home page

SCNpilot_expt_1000_bf_scaffold_10757_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 4752..5228

Top 3 Functional Annotations

Value Algorithm Source
SsrA-binding protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8ACD8_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 158.0
  • Bit_score: 303
  • Evalue 1.50e-79
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 158.0
  • Bit_score: 303
  • Evalue 1.60e-79
smpB; trans-translation protein, binds tmRNA and tRNA (SsrA-binding protein) similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 158.0
  • Bit_score: 302
  • Evalue 6.00e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGCCCCGAAAGGCAGCGAACGCACGGTCAGAAAGATCGTCGCGGAAAACCGCAAGGCGCGGTTCAACTACGAGATCATCGACACCTACGAGGCCGGTCTGGTCCTGACCGGCACCGAGGTCAAGTCGTTGCGCGAGGGCAAGGCCAATATCGCCGAATCCTACGCCTCGGACGAGGGCGACGAGATCTGGCTGATCAATTCGCATCTGCCGGAATATCTGCAGGCCAACCGCTTCAACCACGAGCCGCGCCGCCGCCGCAAGCTGCTGCTCGGCAAGCGCGAGATCAACCGCTTGCGCGCCGCCATCAACCGCGAGGGCATGACGCTGGTGCCGCTGAAGATCTACTTCAACGACAAGGGCCGGGCGAAGCTCGAACTGGCGCTCGCCAAGGGCAAGAAGCTGCACGACAAGCGCGAGACCGAGAAGGAACGCGACTGGAACCGGCAGAAGTCGCGGCTGTTGAAGACGGGCTGA
PROTEIN sequence
Length: 159
MAPKGSERTVRKIVAENRKARFNYEIIDTYEAGLVLTGTEVKSLREGKANIAESYASDEGDEIWLINSHLPEYLQANRFNHEPRRRRKLLLGKREINRLRAAINREGMTLVPLKIYFNDKGRAKLELALAKGKKLHDKRETEKERDWNRQKSRLLKTG*