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SCNpilot_expt_1000_bf_scaffold_5528_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4760..5635)

Top 3 Functional Annotations

Value Algorithm Source
Methyl-accepting chemotaxis protein n=1 Tax=Rhizobium sp. CF080 RepID=J3C9C0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 299.0
  • Bit_score: 316
  • Evalue 2.30e-83
Chemoreceptor McpA {ECO:0000313|EMBL:EYR79612.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 293.0
  • Bit_score: 320
  • Evalue 2.30e-84
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 294.0
  • Bit_score: 316
  • Evalue 1.30e-83

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGACCGCCCGCGATATTGCCGGCACCGCCGGTGAAATGATGGCGAGCGCCGATGCCATCGCCAGGCGGACGGAGCAGCAGGCGGCATCGATCGAGGAGACCGCCGCCGCGCTGGCGCAGATCACCCAGACGGTGGGCGATACCAGCAAGCGCGCTGGCGAGGCAGGCGCCATCGTGCGGCAGACGCGCAGCGCCGCGGAGGAATCCGGCGCTATCGTCCGCGATGCCGTTTCGGCGATGGGTCGGATCGAGCAGTCTTCGCATGAGATCGCCAATATCATCGGTGTGATCGACGAGATCGCCTTCCAGACCAATTTGCTGGCGCTGAATGCCGGTGTGGAAGCGGCCCGCGCCGGTGAAGCGGGCAAGGGCTTTGCCGTCGTGGCCCAGGAGGTGCGCGAACTGGCACAGCGTTCGGCAAAGGCTGCCAAGGAGATCAAGGCGCTAATCACCGTCTCCTCCGAACAGGTCAAGGCGGGCGTTTGCCTCGTCGACAGGACAGGGGCGGCGCTGACGACAATCGTTGCGCGGGTTCAGGAGATAGACGGCAATGTCAGCGCTATCGTCGATGCCTGCCGTGAGCAGGCGATGGGCGTCACCGAGATCGGCCAGGCGGTGAACGTGCTCGACCAGGGCACGCAGCAGAACGCCGCGACCGCCGAGGAGCAGAGTGCGGCCAGCAACATGCTCTCCGAACGCGCGGTGGCGCTGACGCAATTGCTGGCGCGGTTCCAGATCAGCGATCGGTTGGGCGCGGTCAGTTCGCACAGGGTTGGTGCGTCGGACGGCAGAGGCGAAGTGGCGGCGCGCTTTGCCAAGCCGCGGCTCGTGAGCGGTGCCGCGGCGGCGGTCCGCGAAAACTGGGAAGAATTTTAG
PROTEIN sequence
Length: 292
MTARDIAGTAGEMMASADAIARRTEQQAASIEETAAALAQITQTVGDTSKRAGEAGAIVRQTRSAAEESGAIVRDAVSAMGRIEQSSHEIANIIGVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAKAAKEIKALITVSSEQVKAGVCLVDRTGAALTTIVARVQEIDGNVSAIVDACREQAMGVTEIGQAVNVLDQGTQQNAATAEEQSAASNMLSERAVALTQLLARFQISDRLGAVSSHRVGASDGRGEVAARFAKPRLVSGAAAAVRENWEEF*