ggKbase home page

SCNpilot_expt_1000_bf_scaffold_30233_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(395..985)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SZE0_CAUSK similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 202.0
  • Bit_score: 152
  • Evalue 3.90e-34
TPR repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 202.0
  • Bit_score: 152
  • Evalue 1.20e-34
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 194.0
  • Bit_score: 158
  • Evalue 1.30e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Phenylobacterium_70_10 → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGCCCGCCGAACCCGCCGCTTCCGAATTCGACGCCGTCCGCGAAGAGCTGCGCCGCTTGGCCCGCGAAGAGCAGTGGCCGGCCGTCGCAGCCATCCTCGGCCGCCTGCCGAAACTGGCCTCCGACAATCGGGAAGGCGCCATGGCCGCTCAGGACCTTGGCGTCTTCCGCCGCTCGCAAGGCCGCCGTGACGAGGCCTGGGCGGCCTTCGACCAGGCGCTGGCCTCGGCCCGCGTGGTCGAACCGCTCGACGCCGACCTGCTGGCCGGCGCCCTGACCGACGTCGGCGACGTCGCCCTGGAGGCCCGCCGTCCCGAGGTCGCCGTAGGCGTCTATGAAGAGCTGGTGGCGCTGCGCCGCACCCAGGCAGCCGAGGCCCCGGTCGCCACCGCCCGCCGCCTCCTGAGCCTGGCGCTCGAACGCCTGGCCGACGCCCGCGAGGCGCGCGGCTTTCGCAGCAAGGCCCTGACGCTCTACGAGGAAAGCCTCGTCATCGCCCAGGCTCTCGCCGCTGAAGATTTTGAAGCCCACGGCCGCGACCTCGCCCTGACCCGCGAGCGCGCCGAAGAGCTACGCGCCCGCCTCGCCTAG
PROTEIN sequence
Length: 197
MPAEPAASEFDAVREELRRLAREEQWPAVAAILGRLPKLASDNREGAMAAQDLGVFRRSQGRRDEAWAAFDQALASARVVEPLDADLLAGALTDVGDVALEARRPEVAVGVYEELVALRRTQAAEAPVATARRLLSLALERLADAREARGFRSKALTLYEESLVIAQALAAEDFEAHGRDLALTRERAEELRARLA*