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SCNpilot_expt_1000_bf_scaffold_7118_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(5302..6171)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HQ98_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 292.0
  • Bit_score: 303
  • Evalue 2.00e-79
Putative RuBisCO transcriptional regulator {ECO:0000313|EMBL:CDM59056.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 292.0
  • Bit_score: 307
  • Evalue 2.00e-80
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 290.0
  • Bit_score: 279
  • Evalue 1.30e-72

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGACGCTGGAGCAGCTCCGGATTTTCACCGCCGTCGCCGCCTGCCAGCACGTCACGCGGGCAGCGGAACGCCTGAACATGACGCAATCGGCGGTGAGCGCGGCCATTGCGGCGCTGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCAACGGGGCCGGCCAGCAATTTCTCGAGGAGGCGCAAAAAGTGCTGGCGGCGGCGCAAGCGGCGGAGGCGGTGCTGAACGATCTTTCCGGCCTCGGGCGTGGCGCGCTGACGATCATGGCGAGCCAGACGGTTGGCGCCTACTGGCTTCCGGGATGCCTTGCGGCTTTCCACCAGGGGTTTCCCGGCATCCGCCTGCAAGTGTCGCTCGGCAATACCACGGAGGTGACGCAGGCCGTTCTGGAAGGCCGCGCCGAACTCGGCCTCACCGAAGGCACGAACGCGCCCCGCGGCCTCCTTTCGCGACAGATCGCCGAGGACGAGATGATCGTCGTCGTCTCGCCCTTCCATCCCTGGGCGCGGCCGGGCGCGGTCGTCGACGATCTTCGCGACAGCGCCTGGATCCTGCGCGAGGCGGGATCGGGCACGCGACAGGCGTTTGTGCGGCTGCTCGAGGCCGCCGGGCTATCGCTCGATGCCATCGATATCGAGCTGGAACTGCCCGGAAACGAGGCGGTGATCGGTGCCGTTGAGAATGGATTGACCGCCACTCTGGTGTCGCGCAGCGTGGTCGCGGCGCCGCTGCAATACGGCCGCCTGGCGCTTGCGCCAGTCGCTCCGCTGCCGCGTCCCTATTTCCTGCTGCGGCACCCGGAGCGTTATCGCAGCAAATCGGCGGAAGCCTTTGAACGACTCCTTGAAAATAAGGCATGA
PROTEIN sequence
Length: 290
MTLEQLRIFTAVAACQHVTRAAERLNMTQSAVSAAIAALEXXXXXXXXXXXXLNGAGQQFLEEAQKVLAAAQAAEAVLNDLSGLGRGALTIMASQTVGAYWLPGCLAAFHQGFPGIRLQVSLGNTTEVTQAVLEGRAELGLTEGTNAPRGLLSRQIAEDEMIVVVSPFHPWARPGAVVDDLRDSAWILREAGSGTRQAFVRLLEAAGLSLDAIDIELELPGNEAVIGAVENGLTATLVSRSVVAAPLQYGRLALAPVAPLPRPYFLLRHPERYRSKSAEAFERLLENKA*