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SCNpilot_expt_1000_bf_scaffold_3167_curated_24

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 21206..21328

Top 3 Functional Annotations

Value Algorithm Source
Conjugation TrbI family protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3X5_OCHA4 similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 40.0
  • Bit_score: 76
  • Evalue 7.50e-12
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 40.0
  • Bit_score: 76
  • Evalue 2.30e-12
Putative conjugal transfer protein TrbI {ECO:0000313|EMBL:EYR84304.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 40.0
  • Bit_score: 76
  • Evalue 1.00e-11

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 123
ATGAAGGCCGCAGGGCTGTCCACGCTGCTCGCGGTCGGCACGGAGCTGGCGACGAGCGACGAGGACCGACTGATCCGCGCCATCCGCGATGGCGCTCAGGATACCGTCAATCCGGCGGGCTAG
PROTEIN sequence
Length: 41
MKAAGLSTLLAVGTELATSDEDRLIRAIRDGAQDTVNPAG*