ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7064_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4452..4970)

Top 3 Functional Annotations

Value Algorithm Source
UPF0301 protein H009_08546 n=2 Tax=Rhizobium radiobacter RepID=M8ABW7_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 151.0
  • Bit_score: 253
  • Evalue 1.10e-64
UPF0301 protein K538_20655 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 151.0
  • Bit_score: 253
  • Evalue 1.50e-64
conserved hypothetical protein, hypothetical UPF0301 protein similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 151.0
  • Bit_score: 252
  • Evalue 7.70e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGAAGCTGTCGGCATTGACGGACAAGCGCGAACGCGGGTTTCTGGATGGGCACTTTCTGATCGCCATGCCCGGCATGTTCGACAGCAATTTCGCCCGCTCGGTCGCCTATGTCTGCGCCCATTCCTCGGCAGGCGCCATGGGTTTCGTCATCAACCAGCCGCAATCGATCACCTTCACCGACGTGCTGCTGCACCTGCAGCTCATCCGCAAGAACGACGCCATCCTGCTGCCGGACGAGACGCGGCATTTCCCGATCCGCTCCGGCGGGCCGGTGGAGACGGGGCGCGGCTTCGTGCTGCATTCCGACGACTATGCCAGCGACAGCAGCATACCGATCAGTGATGACATCTCGTTGACGGCGACGCTGGACGTGGTCCGGGCGATTTCCAATGGCCGCGGTCCGCGCCGCGCGACGATGATGCTGGGTTACGCCGGCTGGGGCGCCGGCCAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAGCGCGCGCTTGCCCTGA
PROTEIN sequence
Length: 173
MKLSALTDKRERGFLDGHFLIAMPGMFDSNFARSVAYVCAHSSAGAMGFVINQPQSITFTDVLLHLQLIRKNDAILLPDETRHFPIRSGGPVETGRGFVLHSDDYASDSSIPISDDISLTATLDVVRAISNGRGPRRATMMLGYAGWGAGQXXXXXXXXXXXXXXXMSARLP*