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SCNpilot_expt_1000_bf_scaffold_2192_curated_11

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(14894..15733)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 279.0
  • Bit_score: 478
  • Evalue 6.20e-132
trpA; tryptophan synthase alpha chain (EC:4.2.1.20) similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 279.0
  • Bit_score: 469
  • Evalue 6.50e-130
tryptophan synthase subunit alpha n=1 Tax=Rhizobium mongolense RepID=UPI0003B72EEF similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 279.0
  • Bit_score: 474
  • Evalue 8.40e-131

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGACCGCACGTATGGACAAGCGTTTCGCCGAGCTGAAGGCCGAGAACCGCCCGGCGCTGGTCACCTATTTCATGGGCGGCGATCCCGATTACGAGACCTCGCTGCAGATCCTGAAAGCCTTGCCGGCTGCCGGCGCCGACGTGATCGAGCTCGGCATGCCCTTCTCCGATCCGATGGCCGACGGCCCGGCGATCCAGCTCGCCGCGCAGCGCGCGCTGAAGGGGGGCCAGACGCTGGCCCGCACGCTCGATCTGGCGCGCCAGTTCCGTGAAGGGAACCAGACGACCCCGATCGTTTTGATGGGCTACTACAACCCGATCTACATCTACGGCGTCGAACGTTTCCTCGACGACGCGCTGGCTGCCGGCATCGACGGCCTGATCGTCGTCGACCTGCCGCCGGAAATGGATGACGAGCTGTGCATCCCTGCGCTCGCCAAGGGCATCAACTTCATCCGCCTGTCGACGCCGACCACCGACGACAAGCGCCTGCCGACGGTGCTGAAGAACACCTCCGGTTTCGTCTATTACGTCTCGATGAACGGCATCACCGGCTCGGCCTTGCCCGATCCGTCGCTGATTGGCGGCGCGGTCGAGCGCATCAAGGCGCATACGCCGCTGCCCGTTTGCGTCGGCTTCGGCGTCAAGACGGCCGAGCATGCCCGCCTGATCGGCGCGTCCGCCGATGGCGTCGTCGTCGGCACGGCCATCGTCGCCCAGATCGCCGGCAGCCTGTCGGCGGACGGCAAGGCATCGGCGGATACGGTCAATGCTGTCGTCACCCTCGTGCGCGGGCTTGCCAGCGGCGTACACGCCGCTCGCCCCGTTGCTGCCGAATAA
PROTEIN sequence
Length: 280
MTARMDKRFAELKAENRPALVTYFMGGDPDYETSLQILKALPAAGADVIELGMPFSDPMADGPAIQLAAQRALKGGQTLARTLDLARQFREGNQTTPIVLMGYYNPIYIYGVERFLDDALAAGIDGLIVVDLPPEMDDELCIPALAKGINFIRLSTPTTDDKRLPTVLKNTSGFVYYVSMNGITGSALPDPSLIGGAVERIKAHTPLPVCVGFGVKTAEHARLIGASADGVVVGTAIVAQIAGSLSADGKASADTVNAVVTLVRGLASGVHAARPVAAE*