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SCNpilot_expt_1000_bf_scaffold_5142_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 5114..6730

Top 3 Functional Annotations

Value Algorithm Source
GTPase Der n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F805_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 481.0
  • Bit_score: 645
  • Evalue 5.30e-182
GTPase Der {ECO:0000256|RuleBase:RU004481, ECO:0000256|SAAS:SAAS00038180}; Flags: Fragment;; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 437.0
  • Bit_score: 648
  • Evalue 1.10e-182
der; GTP-binding protein, essential for cell growth similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 437.0
  • Bit_score: 644
  • Evalue 2.20e-182

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1617
ATGAGCTTCACCGTCGCCATCGTCGGCCGCCCGAATGTCGGCAAATCCACGCTTTTCAACCGTCTGGTCGGAAAGAAGCTGGCGCTTGTCGACGACACGCCGGGCGTTACCCGCGATCGCCGGCCGGGCGAGGCCAAGCTGGTTGACCTGCGCTTCACCATCATCGATACCGCCGGCCTCGAAGAGGCGGGCGCCGATACGCTGGAAGGGCGCATGCGCGCCCAGACGGAAGCCGCCATCGACGAGGCCGACCTGTCGCTGTTCCTCATCGACGCCAAGGCTGGCCTGACGCCGGTCGACAAGGTGCTCGGCGAAATGCTGCGCAAGCGCGGCAAGCCCGTCGTGCTGGTCGCCAACAAGTCGGAAGCGCGCGGCTCTGACGGCGGTTTCTACGATGCCTTCACCCTCGGGCTCGGCGAGCCTTGCCCGATCTCGGCCGAACACGGCCAGGGCATGATCGACCTGCGCGACGCCATCGTCGCGGCCATCGGCGAGGACGTGGCCTTTCCGCCCGAAATCGACGAGCCGGAGACCAATGTCTCCCTTTCCGCCGATGACGGTGATTTCGGCGAGGGCGAGGAAGAAGCCGCTTATGACGAAACCAAGCCGCTGCGCGTCGCCATCGTCGGCCGCCCCAATGCCGGCAAGTCGACCCTGATCAACCGTTTTCTCGGCGAGGACCGGCTGCTGACCGGCCCGGAGGCCGGGATCACCCGCGATTCCATCTCTGTGGAGTGGGAATGGCGCGGCCGGATGATCAAGATGTTCGACACGGCCGGTATGCGCCGCAAGGCCAAGGTGCAGGAGAAGCTGGAGAAGCTGTCCGTCGCCGATGCGCTGCGCTCGATCCGCTTTGCCGAAACGGTGATCATCGTCTTCGACGCCACCATCCCATTCGAGAAGCAGGACCTGCAGATCGTCGACCTCGTGCTGCGCGAAGGCCGGGCCGCCGTGCTCGCCTTCAACAAGTGGGATATGATCGAGGATCCGCAGGCGGTTCTGGCCGACCTGCGCGAAAAGACCGAGCGGCTGCTGCCGCAGGCGCGCGGTATCCGCGCCGTGCCGATTTCCGGCCAGACGGGCTACGGGCTCGACAAGCTGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCGACAAGGTCTGGAACCGGCGCATTTCCACCGCCCGCCTCAACCGCTGGCTGGAAGGCACGCAGATCCAGCATCCGCCGCCGGCCGTCTCCGGACGCCGCCTGAAGCTGAAATACATGACGCAGGTCAAGGCCCGCCCGCCGGCCTTCATGATCTCCTGCACCCGGCCGGACGCTCTGCCGGAGTCCTATGTACGTTACCTGATCAACGGGTTGCGCAACGATTTCGAGCTGCCGGGCGTGCCGGTGCGAATCCATTTCCGCGCGCCGGAAAATCCGTTCGAGTCGAAAAAGAAGCGGCGCTGAGAATTTGGCGGACCGTGAGGCCCGCCAACCGATTGGCTTTTTCACATCACTTGCAGATGTGCCGCGACAGCGGCAGCGGCGACATGTCCGCCCTGGCGCAGGCCGGGTTGGTCGCGTTGGCGCGGGTGACGTTGTCGAGGAATTGTTGGGCCGCCGCGGTCCAGGAATAG
PROTEIN sequence
Length: 539
MSFTVAIVGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDRRPGEAKLVDLRFTIIDTAGLEEAGADTLEGRMRAQTEAAIDEADLSLFLIDAKAGLTPVDKVLGEMLRKRGKPVVLVANKSEARGSDGGFYDAFTLGLGEPCPISAEHGQGMIDLRDAIVAAIGEDVAFPPEIDEPETNVSLSADDGDFGEGEEEAAYDETKPLRVAIVGRPNAGKSTLINRFLGEDRLLTGPEAGITRDSISVEWEWRGRMIKMFDTAGMRRKAKVQEKLEKLSVADALRSIRFAETVIIVFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDPQAVLADLREKTERLLPQARGIRAVPISGQTGYGLDKLMXXXXXXXXXXXXYRQGLEPAHFHRPPQPLAGRHADPASAAGRLRTPPEAEIHDAGQGPPAGLHDLLHPAGRSAGVLCTLPDQRVAQRFRAAGRAGANPFPRAGKSVRVEKEAALRIWRTVRPANRLAFSHHLQMCRDSGSGDMSALAQAGLVALARVTLSRNCWAAAVQE*