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SCNpilot_expt_1000_bf_scaffold_10200_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(215..1927)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 558.0
  • Bit_score: 992
  • Evalue 5.90e-287
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 558.0
  • Bit_score: 992
  • Evalue 2.60e-286
2-isopropylmalate synthase n=2 Tax=Rhodospirillum rubrum RepID=Q2RUD3_RHORT similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 558.0
  • Bit_score: 992
  • Evalue 1.90e-286

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Taxonomy

Rhodospirillum rubrum → Rhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1713
ATGTTGACCAATCCCGAAATAAAATATCGTCCTTTCGTATCTCCTATCGAACTGGCGGATCGCCGCTGGCCGTCCAACCGGCTGACGAAAGCGCCCCGCTGGCTGTCGACTGACCTGCGCGACGGGAATCAGGCGCTCGCCGATCCGATGGATGTCGAGCGCAAGCTGCGCTTCTACGACATGCTGCTCGCGATTGGATTCAAGGAAATCGAAATCGCGTTTCCATCGGCCTCCCAGACCGAGTTCGACTTCGTGCGTGCGCTGATCGACGGCGGTCGAATTCCCGATGACGTGACGGTTCAGGTGCTCACTCAATCCCGGAAGGACCTGATCACGCGCACCTTCGAGTCTCTCGAAGGTGCGCGGCAAGCGATCGTCCATCTCTACAACGCAACGGCTCCGCTGTTTCGCCGCGTCGTCTTCGGTATGGAACGCCATGAGATCGTCGAGTTGGCCGTCATCGGCGTCACAGCGATGCTGGAGGAAAGCCTGAAGCGGCCAGGGACCGACTGGACCTTCGAATACTCGCCGGAAACCTTCTGCTTCACAGAGCCAGACTTCGCGCTGGAAATTTGCGAACGCGTGCTCGATGTGTGGCAGCCGACGCCGGAGCGCCCGGCGATCCTGAACCTGCCGGCGACGGTCGAGGTGGCGACGCCCAATGTCTACGCCGACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGATGCCGTGGTCATCAGCATTCATCCCCACAACGACCGGGGAACCGCCGTGGCCGCAACTGAGCAGGCCTTGCTCGCCGGCGCGGATCGCGTCGAAGGCTGCCTGTTCGGCAATGGCGAGCGTACCGGCAATGTCGACCTGGTGACACTGGCGCTGAATTTCTACACGCAGGGGATCGATCCGAAACTCTACTTTCCGGCCATCCGAGAGGTGGTCAGGACCGTGGAGTATTGCAACGGGTTGCCGGTCCATCCGCGCCATCCCTATGCCGGCGACCTGGTGCATACCGCCTTCTCCGGCTCGCATCAGGACGCGATCCGCAAGGGTTTCGCCGCCCATGGACAGCGCAATGACGGCCTCTGGGAGATGCCTTATTTGCCTGTCGATCCGGCAGACATCGGAGAGACATATGAGGCGGTAATCCGCGTGAACAGCCAGTCCGGCAAGGGCGGCGTCGCCTGGGTGATCGAACAGGACAAGGGCTTGAAACTGCCGCGGTCACTCCAGGTCGACCTCAGCCGCCGTGTCCAGGAATTCGCCGACAGCAGCGGCAAGGAAATCACGGCCGCGATGATCTGGTCGATCTTCGAACAGGCCTACCATTTGACCGGCCCACAAGAGTTCGAGCTGGGCAGCTATCAGGGTGGAGGCTCGCGTAAAACCGGGAACCAACGCATCTTTGCCGGACGCATTCGCCACAAAGGCCGTGAAATTGCGATAACCGGCCGTGGAAACGGGCTGATCTCCAGTGCCGTATCCGCGCTCGAAGAAAGCTGCGGCGTCGCGCTGGAGGTGCTCGACTATCACGAGCACGCCCTGAAACGCGGCACGGATTCTCGGGCTGTCGCTTATCTCGAGTGCCGGACCCGTGACGGTCGCAAGGTGTTCGGCGTCGGTATCGATGACGATATCGCAACGGCTTCCGTGAAGGCGGTTCTCAGTGCAGCCAGCAACGGCTGTGAACTGCCCCCACTTTCGACCGGACAGTCGGCATAA
PROTEIN sequence
Length: 571
MLTNPEIKYRPFVSPIELADRRWPSNRLTKAPRWLSTDLRDGNQALADPMDVERKLRFYDMLLAIGFKEIEIAFPSASQTEFDFVRALIDGGRIPDDVTVQVLTQSRKDLITRTFESLEGARQAIVHLYNATAPLFRRVVFGMERHEIVELAVIGVTAMLEESLKRPGTDWTFEYSPETFCFTEPDFALEICERVLDVWQPTPERPAILNLPATVEVATPNVYADXXXXXXXXXXXXXXDAVVISIHPHNDRGTAVAATEQALLAGADRVEGCLFGNGERTGNVDLVTLALNFYTQGIDPKLYFPAIREVVRTVEYCNGLPVHPRHPYAGDLVHTAFSGSHQDAIRKGFAAHGQRNDGLWEMPYLPVDPADIGETYEAVIRVNSQSGKGGVAWVIEQDKGLKLPRSLQVDLSRRVQEFADSSGKEITAAMIWSIFEQAYHLTGPQEFELGSYQGGGSRKTGNQRIFAGRIRHKGREIAITGRGNGLISSAVSALEESCGVALEVLDYHEHALKRGTDSRAVAYLECRTRDGRKVFGVGIDDDIATASVKAVLSAASNGCELPPLSTGQSA*