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SCNpilot_expt_1000_bf_scaffold_748_curated_31

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 36584..39577

Top 3 Functional Annotations

Value Algorithm Source
Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:EYR80531.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EYR80531.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 997.0
  • Bit_score: 1727
  • Evalue 0.0
Sarcosine oxidase subunit alpha n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETI5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 997.0
  • Bit_score: 1727
  • Evalue 0.0
sarcosine oxidase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 998.0
  • Bit_score: 1715
  • Evalue 0.0

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2994
ATGAGCGGCGCCAATCGTATCACGGGCAAGGGCCGGCTGACGCCCGCCCGCACCGTCCGTTTCACATTCGACGGCAAGAGCTACACCGCGCTTCAGGGCGATACCGTCGCCTCGGCGCTGCTGGCGCATGGCGTGCATCTGCTTGGCCGCTCGTTCAAGTATCACCGCCCGCGCGGCATCCTCTCGGCCGGCCCGGAAGAGCCGAACGCGCTGCTCGACATTTCCCGCGATTCCGCCCGTCGCCAGCCGAACGTGCGCGCCAGCGTCCAGGAAGTCTTCGATGGCATGAAGGCCGAGTCGCAGAACCGCTGGCCGTCGCTCTCCTTCGACATCGGCGGCATCAACAACCTGATGTCGCCCTTCTTTGGCGCCGGTTTCTACTACAAGACCTTCATGTGGCCGAAGAAGGCCTGGCATTCCATCTATGAGCCCTTCATCCGCCGCGCCGCCGGTCTGGGCGTTGCGCCCACCGAGGCCGATCCGGATCATTATGCCGGTCGTTACGCCCATTGCGACGTGCTGGTCGTCGGCGCCGGCGTCTCCGGTCTTTCCGCGGCGCTTGCCGCGGCTGAAACCGGCGCTGAGGTCATGCTTGTCGACGAACAGCCGGAAGCCGGCGGCGCGCTGCATTTCGATGCCGGCGTCACCATCGACGGGCAGCCGGGTTACGACTGGGCGCAGGCAACGGTCGCCAGGCTCCAGGCCATGGACAATGTCAAGGTCCTGACCCGTACCACGGCCTTCGGCTACTACAACCACAATTTCGTGGCGCTGGTGGAACGGGTCACCGATCATCTGGCCAGCCCAGACCGCCACACGGCGCGCGAGCGCATGTGGCAGGTGCGTGCCAAGCGCGTCATCGTTGCCGCCGGCGCGATCGAGCGCCACATGGTGTTCGCCAACAACGACCGTCCCGGCATCATGCTGGCTTCGGCCGCGCGCACCTTCATCAACCATTTCGGTGTTGCCGTCGGTTCGAAGATCGGCGTCTACACCGCCCATGATTCGGCTTATGAAGCGGCCTTCGACCTGCGCCGCGCCGGCGTTTCCATCGCCGCCATCGTCGATACGCGCGACAATCCGGGGACCGGCGTGCTCGCCGAAGCCCGTTCGCTCGGCATCGATGTCCTCACCGGCCATTCGGTGACGGATACCTCGGGCAAGCTGCGCGTCTCGGCCATGCATGTGACGCGAAACGGCGGCGGCGCGGTGCGCAAGATCCCGGTCGACGCGCTGATCGTCTCTTCCGGCTGGACGCCGTCGGTGCATCTGTTCTCGCAGTCGCGTGGCAAGCTGCGTTTCGATGCCGCGACCCAGCGCTTCCTGCCGGACACCTATGCGCAGAACATGGTCTGCGTCGGCGCCTGCAACGGCACCGACGATCTGCAGGCGGCCATCGACGAGGCGGTTTCCGCCGGTGTCTCGATGGCGCGGGAAGCCGGCATCGACGGTTCGGCGTCGACCACGCCGCGCGGCGAGGCGCGCTTCGCCTGGACCGGCGGCATGCTGGGCGCGGGCGAAGGCGCTGGCGCAGATACGACCGTGAAGGCATTCATCGACTTCCAGCACGACGTCTGCGCCAAGGATATCCGTCTGGCGGTGCGCGAGGGCATGCATTCCATCGAGCATATCAAGCGCTTCACCACCAACGGCATGGCCTCCGACCAGGGCAAGCTGTCGAACATGCACGGCCTGGCGATCGCCGCCGAGGCGCTCGACCGGCCGATCCCGCAGGTGGGCCTCACCACCTTCCGCCAGCCCTACACGCCGGTCACCTTCGGCGCGCTGATCAGCCATTCGCGTGGCGATCTGTTCGATCCGGCTCGCAAGACGCCGATGCATGCCTGGGAAGAGGCGCATGGCGCCGAATTCGAGGATGTCGGCAACTGGAAGCGCGCCTGGTATTACCCGCGCGCCGGCGAGACCATGCATGAGGCGGTCAACCGCGAATGCAGGACGGTGCGCACTGTTGCCGGCGTCTTCGACGCCTCGACGCTCGGCAAGATCGAGGTCGTCGGCCCGGATGCCGCCGCCTTCCTCAACCTGATGTACACCAATGCCTGGGATACGCTGAAGCCCGGCCGCTGCCGCTACGGCATCATGACCCGCGAGGACGGCTTCGTCTATGACGACGGCGTCGTCGGGCGACTGGCCGAGGATCGTTTCCATGTGACCACCACCACCGGCGGCGCGCCGCGCGTGCTGCAGCACATGGAAGACTATCTGCAAACCGAGTTCCCGCATCTGAACGTCTGGCTGACCTCGACCACCGAGCAATGGGCGGTCATCGCCGTCCAGGGCCCGAAGGCGCGCGAGATTCTCGCGCCGCTGGTCGAAGGAATCGACATGTCGCCGGAATCCATGCCGCATATGAGCGTGGCTGAAGGCAAGATTTGCGGCGTGCCGACGCGTCTGTTCCGCATGTCGTTCACCGGCGACATGGGCTTCGAAGTCAACGTGCCCGCCGACTACGGCCAGGCGATCTGGGAAGCGATCTGGGCGAGAGCCGAGCCGATGGGCGCCTGCGTCTACGGCACCGAGACCATGCACGTGTTGCGCGCCGAGAAGGGCTACATCATCGTCGGCCAGGATACGGACGGCACGGTGACACCGGAAGATGCTGGCGTGGGCTGGGCCGTGTCCAAGAAAAAGACGGACTTCGTCGGTATTCGCGGCCTCAAGCGCCCCGATCTGGTGAAGGAAGGCCGCAAGCAGTTGGTCGGCATCACCACCAAGGATCCGCATGTGGTGCTGGAGGAAGGCGCGCAGGTCGTCGCCGATCCGAACCAGCCGAAGCCGATGACCATGCTCGGTCACGTCACCTCGTCCTACTGGTCGGAGAATTGCGGGCGTTCCATCGCTTTCGCATTGATTGCCGGCGGACGGGCGAAGATGGGGCAGACGCTCTATGTGCCGATGCCGGACAGGACGATCCCCGTCGAAGTGACGGATCTGGTGTTCTTTGACAAGGAAGGGGGCCGCATCAATGGCTGA
PROTEIN sequence
Length: 998
MSGANRITGKGRLTPARTVRFTFDGKSYTALQGDTVASALLAHGVHLLGRSFKYHRPRGILSAGPEEPNALLDISRDSARRQPNVRASVQEVFDGMKAESQNRWPSLSFDIGGINNLMSPFFGAGFYYKTFMWPKKAWHSIYEPFIRRAAGLGVAPTEADPDHYAGRYAHCDVLVVGAGVSGLSAALAAAETGAEVMLVDEQPEAGGALHFDAGVTIDGQPGYDWAQATVARLQAMDNVKVLTRTTAFGYYNHNFVALVERVTDHLASPDRHTARERMWQVRAKRVIVAAGAIERHMVFANNDRPGIMLASAARTFINHFGVAVGSKIGVYTAHDSAYEAAFDLRRAGVSIAAIVDTRDNPGTGVLAEARSLGIDVLTGHSVTDTSGKLRVSAMHVTRNGGGAVRKIPVDALIVSSGWTPSVHLFSQSRGKLRFDAATQRFLPDTYAQNMVCVGACNGTDDLQAAIDEAVSAGVSMAREAGIDGSASTTPRGEARFAWTGGMLGAGEGAGADTTVKAFIDFQHDVCAKDIRLAVREGMHSIEHIKRFTTNGMASDQGKLSNMHGLAIAAEALDRPIPQVGLTTFRQPYTPVTFGALISHSRGDLFDPARKTPMHAWEEAHGAEFEDVGNWKRAWYYPRAGETMHEAVNRECRTVRTVAGVFDASTLGKIEVVGPDAAAFLNLMYTNAWDTLKPGRCRYGIMTREDGFVYDDGVVGRLAEDRFHVTTTTGGAPRVLQHMEDYLQTEFPHLNVWLTSTTEQWAVIAVQGPKAREILAPLVEGIDMSPESMPHMSVAEGKICGVPTRLFRMSFTGDMGFEVNVPADYGQAIWEAIWARAEPMGACVYGTETMHVLRAEKGYIIVGQDTDGTVTPEDAGVGWAVSKKKTDFVGIRGLKRPDLVKEGRKQLVGITTKDPHVVLEEGAQVVADPNQPKPMTMLGHVTSSYWSENCGRSIAFALIAGGRAKMGQTLYVPMPDRTIPVEVTDLVFFDKEGGRING*