ggKbase home page

SCNpilot_expt_1000_bf_scaffold_748_curated_37

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(43859..44878)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5PZI8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 339.0
  • Bit_score: 626
  • Evalue 2.10e-176
LacI family transcriptional regulator {ECO:0000313|EMBL:EJT04058.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 339.0
  • Bit_score: 626
  • Evalue 2.90e-176
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 339.0
  • Bit_score: 623
  • Evalue 3.30e-176

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CCGE 510 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
GTGGCTCAAAAGATAAAGCTCTCGACGATCGCCGAAACGCTTGGCATTTCAACGGCGACCGTCTCCCTTGCCTTACGTGACAGCCCGCTGGTGGCGTCGGCCACACGCGACAAGATCAAGGAGCAGGCCAGGGCGCTGGGTTACATCTACAATCGCCGCGCCGCCAGTCTGCGCACCTCGCGCTCCGGCATCATCGGCGTCGTGGTGCATGACATCATGAACCCGTTCTACGGCGAAATCCTGAAAGCCATCGAAAGCGAGCTGGATCGCAGCCAGCACACTTTCATTCTTTCCAACCATTACGATTCGGTCGAGAAGCAGCGCAATTTCATCGAGACGCTGCTGCAACTCGGCGGCGACGGCGTCATCATGTCGCCGGCCATCGGCACGCCGATGGAGGACATCAAGCTTGCCGAGCAGAACGGCATGCCGGCCATCCTCGTCGCCCGCTCGATGGAGGGCGTCGACCTGCCCACCTATCGCGGCGACGACAGTTATGGAATTTCGCTGGCGACCAACCACCTGATCGGTCTCGGCCACCGCACCATCGCCATGATCGGCGGCACCGACCAGACCTCGACCGGCCGCGACCGCTACCAGGGCTATGTCAATGCGCTGCGCAAGGCCGGCATCGAGGTCGATCCGGACCTGCGCATTCCCGGCCCCCGCTCCAAGCAGGGCGGTTTCGAGGCGGCGGTGCATTTCCTGTCGCTGCCGCAGAAGCCGACGGCGGCCGTCTGCTGGAACGACCTCGTCGCCATCGGCCTGATGAACGGCATCGCCCGCGCCGGGCTGGTGCCGGGCGTCGACATCTCCGTCACCGGCTATGACGACCTGGAGGAAGCGGCGATCGCCACACCGGCGCTGACGACGGTGTGGAACGGGCAGGCCGAAGTCGGCCGGCTCGCCGCCCGCGCCCTGCTCGACCGTCTGCTCGGCAGTCACGAGCCGGATGGCATCCATCTCATCAAGCCGGAAATGCGCATCCGCCAGTCCACCGGCCCGATCAACAGGCGGTAA
PROTEIN sequence
Length: 340
VAQKIKLSTIAETLGISTATVSLALRDSPLVASATRDKIKEQARALGYIYNRRAASLRTSRSGIIGVVVHDIMNPFYGEILKAIESELDRSQHTFILSNHYDSVEKQRNFIETLLQLGGDGVIMSPAIGTPMEDIKLAEQNGMPAILVARSMEGVDLPTYRGDDSYGISLATNHLIGLGHRTIAMIGGTDQTSTGRDRYQGYVNALRKAGIEVDPDLRIPGPRSKQGGFEAAVHFLSLPQKPTAAVCWNDLVAIGLMNGIARAGLVPGVDISVTGYDDLEEAAIATPALTTVWNGQAEVGRLAARALLDRLLGSHEPDGIHLIKPEMRIRQSTGPINRR*