ggKbase home page

SCNpilot_expt_1000_bf_scaffold_9901_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 437..1360

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CD04_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 279.0
  • Bit_score: 167
  • Evalue 2.40e-38
Uncharacterized protein {ECO:0000313|EMBL:EYR81421.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 322.0
  • Bit_score: 213
  • Evalue 4.10e-52
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 305.0
  • Bit_score: 118
  • Evalue 4.00e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGAACGCCAACGCCCAACTCAAAGCCTATATCGATCGCATCTTGCGTTGCCGCGAGGCGGAAGACCTCGCCAAGGAAGACACGAAAGCCGTTTATGCCGAACTCGCTGCTGAGGGCTACGAAAAGGCCATCGTCGGTCAGGTCGTGACGTTCCTGCGCAAGCGTGAAAAGGACGGCGACAAACTGTCCGAGCAGTCGGCCAAGTTCGACCTGTATTTGGAAGCCTACGAGCGCCCCTCGCACGCGCATACGCGTGTAAGGGACGACGATGTCAAGCCGCGCCTGATCAAGCAGGTCGTCGACGGCATGCAGACCGAAGCCGGCCGCGCCGCGCTGGTCGCCGCTGTCGATATCATCGTCGAGCGTGAAAAGGCGGAACAAGCTGAGCCGGGGGCAGCCGCAGAGGTCGCCGGCGATGATTTGCGCGAACCTGCTGCTGCGGAGCAGGGTCAAATTATCCGGGAAGGGGATGCGCCCCGTGAAACCGGCCGCTTCGGCGGTGACGCTTCGTGCCCGGATACCGGATCGCAGATGGACCGCGCCACGGAAGGCTCTTTCGAGACCGGAAGTGAGGCAGCGGAAAAGGGGCGCGAGGCAATCCCGGCTGGACCGGAAGGCGCTGACCTGAGCCATGCTGGAGCCGGTGAAAGCCCGGCAACCCAAATCACAATCCCCAGCGACGACAGCGAAGCGACCGGCAATTGTGCCGGCGATGCGAGCGTCGATGCCAACACAGGAGGCAGCCATGTAACAGGATCCTCCACTCCCGCCGCAACGACGGCCGAAGGCTATGCATCTGCGCCTTCGGCCAATCGGTTGGCACTTCGTCCTCATTGCCTCAACCCTGGAGAGGCTTGCGGAGGCTGGGGATCGAACCACTGCCACGCCTGCAAACTGGCGATGAAAGAGAAGGAATTGGCATGA
PROTEIN sequence
Length: 308
MNANAQLKAYIDRILRCREAEDLAKEDTKAVYAELAAEGYEKAIVGQVVTFLRKREKDGDKLSEQSAKFDLYLEAYERPSHAHTRVRDDDVKPRLIKQVVDGMQTEAGRAALVAAVDIIVEREKAEQAEPGAAAEVAGDDLREPAAAEQGQIIREGDAPRETGRFGGDASCPDTGSQMDRATEGSFETGSEAAEKGREAIPAGPEGADLSHAGAGESPATQITIPSDDSEATGNCAGDASVDANTGGSHVTGSSTPAATTAEGYASAPSANRLALRPHCLNPGEACGGWGSNHCHACKLAMKEKELA*