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SCNpilot_expt_1000_bf_scaffold_1565_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 4666..5838

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2H2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 390.0
  • Bit_score: 292
  • Evalue 6.30e-76
Uncharacterized protein {ECO:0000313|EMBL:KFL25021.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 390.0
  • Bit_score: 313
  • Evalue 3.70e-82
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 390.0
  • Bit_score: 287
  • Evalue 8.30e-75

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Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
ATGGATACCGCGACGCTGATCCTCTCGAATGCGGTGCTGCGGCTCGGCAGCATCCGCGCCGCCGCCCGCGCGCTGGAGCGCCCGGCCGCCACGGTCGCCGCAGCCGTCGCGCGGTTGGAGGCGGCGCTGGCGGTGGAACTCGTACGCCGCACCGGCTCGTCGCTGATGCTGACGCTGGAGGGCGCGCGCCTGCTGCCGCGCATCGAGGCGCTCTGTGGCCTGTCGCTTGGCCTTTACCGAGGTGGAGAGCAGCGGTTGTCACCGGCTGCGGTCAGTCTCGAAGCCCTGTCGCGGCTGAACCAAGTGGCCCGCAGCGGCAGCATTCGCGCGGCAGCCCGCGAGATGGGCCTCGGCCAGCCGCAACTGACCCGCCAGATCGCCCATGTCGAGGGAGTGCTCGGTTACGCCATTTTCGAGCGCGGCCGCGATGGCGCCCGGCTGACGCCGGCGGGCGTCGCAGCGGTGGAGCGCATCCGCCAGATCGAAACCCTGTGGCGCGAGATCGCCGATGCGGCCTCGGATCGTTTCCGGCGCACCGAAACGGTGGTGCGTATCGGCTCGGTCGTGCCGCTGGGCCCGGAAAGCCGTATCGCCGACCTGCTGGCGGACCTCGCCGCCAATTGGCGAAGCCGCCATCCGCGCCAGCCGATCTTCATCGGCTCCATGATCGCCGAGGAATTGCTGACCAGCCTCAAGCGCGGCCTGTTCGACGTCGTCTTCCTCGATGTCGAGCGCCTGCCGGAGGATCTGGAGGGGCATCTGATCTCCGTCTCGCCGTTGACGCTGGTCGGGCCTGCAGATCAGTTGAAAGACCTTTCCGGCGACGACCGCGCCGGTCTGGCGACATTGCTGGCGACGCATCCCATCGCGCTGCCGAGCCCGCGCAGCGGGTTGCGCCAGAAGATCGATCCGCTGCTGGAAGCGCTTTTCGGGAGGGATGGGCGGCGTGCGCCCGAAATCGTCGAGGTCGATTCCATCCCGGTGATCCTGAAACTCGTCACCCGTCACCGTTTCGTCTCGGTCCTGCCCGGGGCGTCGCTGGCCGCGCTTGATCCGGCCGTCGCCCGGCTGGAACTGGGGCCTGATTTTTCCCTGCCGCTATGGATCGCCTGGCCGCGCGGTCGCGCCGGCGACAGTATCCAGCGCCAGGTGCTGGCCTTGTTGCGTAAGTAA
PROTEIN sequence
Length: 391
MDTATLILSNAVLRLGSIRAAARALERPAATVAAAVARLEAALAVELVRRTGSSLMLTLEGARLLPRIEALCGLSLGLYRGGEQRLSPAAVSLEALSRLNQVARSGSIRAAAREMGLGQPQLTRQIAHVEGVLGYAIFERGRDGARLTPAGVAAVERIRQIETLWREIADAASDRFRRTETVVRIGSVVPLGPESRIADLLADLAANWRSRHPRQPIFIGSMIAEELLTSLKRGLFDVVFLDVERLPEDLEGHLISVSPLTLVGPADQLKDLSGDDRAGLATLLATHPIALPSPRSGLRQKIDPLLEALFGRDGRRAPEIVEVDSIPVILKLVTRHRFVSVLPGASLAALDPAVARLELGPDFSLPLWIAWPRGRAGDSIQRQVLALLRK*