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SCNpilot_expt_1000_bf_scaffold_14261_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(493..1476)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZYR3_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 314.0
  • Bit_score: 480
  • Evalue 1.10e-132
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAK70370.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 327.0
  • Bit_score: 510
  • Evalue 1.30e-141
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 314.0
  • Bit_score: 480
  • Evalue 3.30e-133

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGCTTGATCGAAAGTCCGAAACTGAGCGCAAGCCGCTCGATCCTGATCTTGTCAGCGAATTGCTGATGGGCATGCGCCTCGTCGGCCTCGACTATCGCCGCATCGAGGCGGCGGCGCCGTTCGGCTTCTCCTTCGGCGAGGTCGGAGGCCGCGCGCAGTTCCATTTCGTGGCGCGCGGGCCGGTGCAGTTGCGTTTGCCGGGCGGCATCGTCCATGGACTGGAAACCGGGGATGCGGTGCTGTTGCCGCGCGGCGGGTTCCATGCGCTGGTCTCGTCCGACGAGATCAAATGCCGGGATATCCGCGCGCTTGAAGCGGCGCCGCTGTGCAGTTCGGTCAGCGCCATCACCGCCTGCGACGGCAAGACGGGGCCGGAAGCGCGGGCAATCGTCTTCAGCGGCTGCATGGAATTCGATCTCGGCGGGTTGCATCCGCTGGTGGCGCTGATGCCGGAGGTGATGCGGGTCGGGACGCTGCTGGATCGCTATCCCGAAATCCTGCCGATGCTGGAGGCGATGGAGCGCGAGGCCAAGGGCGGGCGGGCCGGCTTTGCCGGCATTCTGGCACGACTTGCTGATGTGGTGGCGGCCTTCATCGTCCGCGCCTGGGTGGAATGCGGTTGCGGCGATGCCAGTGGCTGGATCGCGGCGTTGCGCGATCCGCGTCTCGGCCGCGTCATCGTCGCCATCCATGCCAACCCCGGCCATGACTGGACGCTGGTCGAACTGGCCGACCGCATGGGCGCTTCCCGCTCGGTCTTTGCCGAGCGTTTTCTGGAAGTGACCGGCGTCACGCCGTTGCGTTATCTGACGGAGCTGCGCATGAGGCTTGCGACGCAATGGATCGCTAAAGAGCGCATGCCGATCGAAACCGCCGCGCAAAAGCTCGGCTACGGTTCGCAGGCCGCCTTCAGCCGCGCTTTCAAACGCATCACCGGCCACCCGCCCGGCGCTTTGACGGGTTCGAAGGTCGCCAACGGTTAG
PROTEIN sequence
Length: 328
MLDRKSETERKPLDPDLVSELLMGMRLVGLDYRRIEAAAPFGFSFGEVGGRAQFHFVARGPVQLRLPGGIVHGLETGDAVLLPRGGFHALVSSDEIKCRDIRALEAAPLCSSVSAITACDGKTGPEARAIVFSGCMEFDLGGLHPLVALMPEVMRVGTLLDRYPEILPMLEAMEREAKGGRAGFAGILARLADVVAAFIVRAWVECGCGDASGWIAALRDPRLGRVIVAIHANPGHDWTLVELADRMGASRSVFAERFLEVTGVTPLRYLTELRMRLATQWIAKERMPIETAAQKLGYGSQAAFSRAFKRITGHPPGALTGSKVANG*