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SCNpilot_expt_1000_bf_scaffold_933_curated_26

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(29631..30641)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F3D9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 330.0
  • Bit_score: 346
  • Evalue 3.20e-92
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EHS52778.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 330.0
  • Bit_score: 346
  • Evalue 4.50e-92
GntR family transcriptional regulator; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 327.0
  • Bit_score: 301
  • Evalue 2.80e-79

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
GTGACGTTGAGCGACGTCGCGCGCGTTGTCGGAGTGAGCGCCATCACAGTTTCGCGCGCCTTGCGCGTCCCCGGCCGAGTGTCGCCGGAATTGCGCAACCGTATTCTCGAAACCGTCGAGCAGATGGGCTATGTGCCCGATCTCGCGGCACGGGCGCTCGCCAGCCGCGACAGCGGCGTCATCGGCCTCATCATGCCGACGCTCACCCATGTGCCGCTGCTCGACATCATGACCGGCATCGAGGATCGGCTCTGCGGCAGCGGCTTCGGCATCCAGTACGCCAATACCCGGTTCGATCAGGCGACGATGGAGCAGAAGGTGCGCATGCTGCTCGCCCAGCGCCCGAGCGGGCTGATCTTCGTCGGCGTCGCTCCGGCCGGCGAAACGCTGGCGCGGCTGCGGCATGCGCCCTGCCCGATCGTGCAGATCAGCGATGTCAGCAGCGAACGGGCAGGCTCGGTGATCGGTATCGATACGGAACTGGCCAGCCGCATGGCGACCCGCCACATGCTCGACAAGGGCTATCGCCGCATCGCGCTGGTCGACGGCCGGCCGCGCGGCGGAAGTCTGCTGCGCCGCGAAGGCTACGAGAATGCGATGCGCGATGCCGGCGTCTACGATCCCGCCTGGGAGATCTTCGACGATGCGCCGAGCAGCGTCGGGCTCGGATCGCGATTCCTGCGGCGGATTCTCGACACCATTCCGGACGCGGACGGCGCCTTTTGCCACAATGACGATCTGGCGCTCGGCATCCTGTTCGAATGCCAGCGGCTCGGCATCCGCGTGCCGCAGGATTTCGGCATATGCGGCTTCAACGATCTCGATTATGCCGCTTTGGCGCAACCGTCGCTAACGACGGTGCGGGTGCCGCGCTACGACCTCGGCGAGCAGGCCGCCGACATGATGATCCGCGTCATACGCGGGACCGCATCCCGCGACGAAGTCGTCGATATCGGCTTCACCCTGTTCGAAAGGCAATCGACACAGCGCGACAGGCCGGCCGGCACCTGA
PROTEIN sequence
Length: 337
VTLSDVARVVGVSAITVSRALRVPGRVSPELRNRILETVEQMGYVPDLAARALASRDSGVIGLIMPTLTHVPLLDIMTGIEDRLCGSGFGIQYANTRFDQATMEQKVRMLLAQRPSGLIFVGVAPAGETLARLRHAPCPIVQISDVSSERAGSVIGIDTELASRMATRHMLDKGYRRIALVDGRPRGGSLLRREGYENAMRDAGVYDPAWEIFDDAPSSVGLGSRFLRRILDTIPDADGAFCHNDDLALGILFECQRLGIRVPQDFGICGFNDLDYAALAQPSLTTVRVPRYDLGEQAADMMIRVIRGTASRDEVVDIGFTLFERQSTQRDRPAGT*