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SCNpilot_expt_1000_bf_scaffold_1159_curated_26

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(27503..27910)

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AYL0_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 135.0
  • Bit_score: 264
  • Evalue 8.40e-68
DNA-binding protein {ECO:0000313|EMBL:EPR20912.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 135.0
  • Bit_score: 264
  • Evalue 1.20e-67
basic membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 135.0
  • Bit_score: 262
  • Evalue 1.00e-67

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGCAGGTCGCCGCCGAACGCGGCATTCACGCCTTCGGCCAGGCCTCCGACATGATCGCCGCCGGCCCGAAGACGCAGCTGACCGCCATCGTCGACACCTGGGGCGCCTATTACATCAAGCGCACCCAGGCCCTGCTCGACGGCACCTGGAAGTCGGAGCAGATCTGGGACGGCCTCAAGGACGGCATCCTGACCATGGCGCCCTACACCAACATGCCCGACGACGTGAAGAAGCTGGCCGAGGAAACCGAAGCCAAGATCAAGTCGGGCGAGTTGCATCCCTTCACCGGCCCGGTGAAGAAGCAGGACGGTTCGGAATGGCTGAAGGCCGGCGAAAAGTCTGATGACGGCACGCTGCTCGGCATGAATTTCTACGTAGCCGGCGTCGACGACAAGCTGCCGCAATAA
PROTEIN sequence
Length: 136
MQVAAERGIHAFGQASDMIAAGPKTQLTAIVDTWGAYYIKRTQALLDGTWKSEQIWDGLKDGILTMAPYTNMPDDVKKLAEETEAKIKSGELHPFTGPVKKQDGSEWLKAGEKSDDGTLLGMNFYVAGVDDKLPQ*