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SCNpilot_expt_1000_bf_scaffold_1159_curated_29

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(30595..32166)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 517.0
  • Bit_score: 814
  • Evalue 1.50e-233
  • rbh
Putative sugar ABC transporter, ATP-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D033_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 512.0
  • Bit_score: 832
  • Evalue 2.30e-238
Putative sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EYR79990.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 512.0
  • Bit_score: 832
  • Evalue 3.20e-238

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1572
GTGAAGCCGCACGACATGTCGCGACCCGACGCCTTGCTGTCGGTGCGCAAGCTGACGAAGCTGTTTGGCAGTTTTGCCGCCTGCGACGGCATCGACATCGAGATACAACCGGGTGAAATCCATGCGCTGCTGGGGGAAAACGGCGCCGGGAAATCGACCCTCGTCAAAATGCTGTTCGGCGTTCTCACGCCGAGCGCCGGGCAGATCGTCTGGAAGGGCCAACCGGTGCGAATCGGTTCGCCCGGCGAAGCGCGCAAGACCGGCATCGGCATGGTTTTCCAGCATTTTTCGCTGTTCGAAGCGCTGACGGTCGCCGAAAACATCGCGCTGTCGCTCGATCCCGGTATTTCGCTGGCGCGCATCTCCGATGAGGCGGCGGCGCTGTCGCATGCCTATGGCCTCCCGCTCGATCCCAAGGCGCATGTGGCCGATCTCTCGGTCGGCGAACGCCAACGCATCGAGATCGTGCGCGCCCTGCTGCAAAACCCGCAACTGATCATTTTGGACGAGCCGACCTCGGTGCTGACGCCGCAGGAGGCCGACCGCCTGTTCGAAACGCTGGCCAAGCTGAAGGCCGAGGGCCGTTCGGTCCTCTATATCAGCCATCGCCTGGAAGAAGTGCAGCGCATCTGCGACCGCGCCACCGTCCTGCGCCACGGCAAGGTGACCGGGGCCTGCGACCCGAAGCGAGAAACGCCGGCCTCGCTGGCGCGTATGATGGTCGGCAACGAGGTTGCCACGGTCAGCGCCGCCGGCACGACGACGCGCGGCGATGTCCTGCTGCAGGCCCGCAATCTCAATGTCCCGGCGCGCACGCCTTTTGCCGTGTCGCTGAAGAATCTTTCGCTGACGGTGCGCAGCGGCGAGGTTCTCGCCATCGCCGGTGTGGCCGGCAACGGTCAGAGCGAATTGTTCGATGCGCTATCGGGCGAATATCCGGTCGCCGACAACGACGCCATCCGCATCCGCGACCACGCGGTCGGTGCGTCGGGAATTACGGCAAGGCGGCTGATCGGCGCAAGCTTCGTGCCGGAGGAGCGCCATGGCCACGCAGCCGTCACCGGCATGTCGCTGTCGGACAATCTGGTGCTGGCCCGCAGCCAGTCGGATCGCCGCGCGTTTCTCACCGGTGGCCCGCTCGGCATTATCCGCCACAAGATCGTGCGCGAGGCGGCGAAACGCATTTCCGCCGCCATGGACGTGCGCAAGAGCGGCGAGGATCCGCCGGCCGGCTCGCTGTCCGGCGGCAATCTGCAAAAATTCATCGTCGGGCGCGAGCTGGATCGCCAGCCGAGCGTCATGATCGTCAACCAGCCGACCTGGGGCGTCGATGCGGGGGCGGCGAGCCGCATCCGCCAGGCGCTGGTCGATCTGGCGAAATCCGGCTCGGCCGTGCTGGTCATCAGCCAGGATCTGGACGAGATTTTCGAAGTCGCCACCGAAATCGCCGTCATCAACGAGGGGCGCCTGTCCAATGCCTATCCGGCGCAGGACATGACCCGCGAAAAGATCGGCCTGCTGATGGGTGGGGCGCACGACAAGGCCGGCGCGGAGGCGCAGCATGCGCATTGA
PROTEIN sequence
Length: 524
VKPHDMSRPDALLSVRKLTKLFGSFAACDGIDIEIQPGEIHALLGENGAGKSTLVKMLFGVLTPSAGQIVWKGQPVRIGSPGEARKTGIGMVFQHFSLFEALTVAENIALSLDPGISLARISDEAAALSHAYGLPLDPKAHVADLSVGERQRIEIVRALLQNPQLIILDEPTSVLTPQEADRLFETLAKLKAEGRSVLYISHRLEEVQRICDRATVLRHGKVTGACDPKRETPASLARMMVGNEVATVSAAGTTTRGDVLLQARNLNVPARTPFAVSLKNLSLTVRSGEVLAIAGVAGNGQSELFDALSGEYPVADNDAIRIRDHAVGASGITARRLIGASFVPEERHGHAAVTGMSLSDNLVLARSQSDRRAFLTGGPLGIIRHKIVREAAKRISAAMDVRKSGEDPPAGSLSGGNLQKFIVGRELDRQPSVMIVNQPTWGVDAGAASRIRQALVDLAKSGSAVLVISQDLDEIFEVATEIAVINEGRLSNAYPAQDMTREKIGLLMGGAHDKAGAEAQHAH*